Strain Fitness in Marinobacter adhaerens HP15 around HP15_1339

Experiment: L-Leucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1338 and HP15_1339 are separated by 517 nucleotidesHP15_1339 and HP15_1340 are separated by 801 nucleotides HP15_1338: HP15_1338 - conserved hypothetical protein, at 1,405,696 to 1,406,055 _1338 HP15_1339: HP15_1339 - cupin 2 conserved barrel domain protein, at 1,406,573 to 1,406,938 _1339 HP15_1340: HP15_1340 - GCN5-related N-acetyltransferase, at 1,407,740 to 1,408,276 _1340 Position (kb) 1406 1407Strain fitness (log2 ratio) -2 -1 0 1 2at 1405.642 kb on + strandat 1405.684 kb on - strandat 1405.689 kb on - strandat 1405.713 kb on - strandat 1405.813 kb on - strand, within HP15_1338at 1405.817 kb on + strand, within HP15_1338at 1405.856 kb on + strand, within HP15_1338at 1405.974 kb on - strand, within HP15_1338at 1406.010 kb on - strand, within HP15_1338at 1406.180 kb on + strandat 1406.180 kb on + strandat 1406.187 kb on - strandat 1406.195 kb on + strandat 1406.351 kb on - strandat 1406.351 kb on - strandat 1406.428 kb on + strandat 1406.621 kb on + strand, within HP15_1339at 1406.665 kb on + strand, within HP15_1339at 1406.807 kb on + strand, within HP15_1339at 1406.807 kb on + strand, within HP15_1339at 1406.815 kb on - strand, within HP15_1339at 1406.815 kb on - strand, within HP15_1339at 1406.815 kb on - strand, within HP15_1339at 1406.855 kb on + strand, within HP15_1339at 1406.880 kb on - strand, within HP15_1339at 1407.038 kb on + strandat 1407.112 kb on - strandat 1407.252 kb on + strandat 1407.270 kb on + strandat 1407.291 kb on - strandat 1407.291 kb on - strandat 1407.291 kb on - strandat 1407.435 kb on + strandat 1407.440 kb on + strandat 1407.555 kb on + strandat 1407.605 kb on + strandat 1407.635 kb on - strandat 1407.643 kb on - strandat 1407.843 kb on + strand, within HP15_1340

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine as (N)
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1,405,642 + +0.5
1,405,684 - -0.6
1,405,689 - -0.5
1,405,713 - +0.4
1,405,813 - HP15_1338 0.33 -0.3
1,405,817 + HP15_1338 0.34 -0.3
1,405,856 + HP15_1338 0.44 -1.0
1,405,974 - HP15_1338 0.77 +0.1
1,406,010 - HP15_1338 0.87 +1.2
1,406,180 + +0.4
1,406,180 + -0.4
1,406,187 - +1.8
1,406,195 + -1.5
1,406,351 - -0.5
1,406,351 - +0.8
1,406,428 + -0.5
1,406,621 + HP15_1339 0.13 -2.6
1,406,665 + HP15_1339 0.25 +1.5
1,406,807 + HP15_1339 0.64 -0.1
1,406,807 + HP15_1339 0.64 +1.3
1,406,815 - HP15_1339 0.66 +0.8
1,406,815 - HP15_1339 0.66 +0.1
1,406,815 - HP15_1339 0.66 -0.4
1,406,855 + HP15_1339 0.77 +0.8
1,406,880 - HP15_1339 0.84 +0.2
1,407,038 + +0.1
1,407,112 - +1.8
1,407,252 + +0.3
1,407,270 + +0.1
1,407,291 - +1.0
1,407,291 - -0.3
1,407,291 - -0.8
1,407,435 + +0.2
1,407,440 + +0.4
1,407,555 + -0.4
1,407,605 + -0.0
1,407,635 - +2.5
1,407,643 - +1.1
1,407,843 + HP15_1340 0.19 +1.6

Or see this region's nucleotide sequence