Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2534 and DvMF_2535 are separated by 113 nucleotides DvMF_2535 and DvMF_2536 are separated by 27 nucleotides DvMF_2536 and DvMF_2537 are separated by 10 nucleotides
DvMF_2534: DvMF_2534 - formate dehydrogenase beta subunit (RefSeq), at 3,199,714 to 3,200,466
_2534
DvMF_2535: DvMF_2535 - Methyltransferase type 11 (RefSeq), at 3,200,580 to 3,201,257
_2535
DvMF_2536: DvMF_2536 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,201,285 to 3,202,718
_2536
DvMF_2537: DvMF_2537 - PAS/PAC sensor hybrid histidine kinase (RefSeq), at 3,202,729 to 3,206,397
_2537
Position (kb)
3201
3202
3203 Strain fitness (log2 ratio)
-1
0
1 at 3200.340 kb on - strand, within DvMF_2534 at 3200.461 kb on + strand at 3200.461 kb on + strand at 3200.461 kb on + strand at 3200.469 kb on - strand at 3200.469 kb on - strand at 3200.498 kb on - strand at 3200.577 kb on + strand at 3200.818 kb on + strand, within DvMF_2535 at 3200.818 kb on + strand, within DvMF_2535 at 3200.826 kb on - strand, within DvMF_2535 at 3201.142 kb on - strand, within DvMF_2535 at 3201.215 kb on + strand at 3201.223 kb on - strand at 3201.339 kb on + strand at 3201.722 kb on - strand, within DvMF_2536 at 3202.132 kb on - strand, within DvMF_2536 at 3202.134 kb on + strand, within DvMF_2536 at 3202.142 kb on - strand, within DvMF_2536 at 3202.142 kb on - strand, within DvMF_2536 at 3202.299 kb on + strand, within DvMF_2536 at 3202.312 kb on + strand, within DvMF_2536 at 3202.329 kb on + strand, within DvMF_2536 at 3202.540 kb on - strand, within DvMF_2536 at 3202.805 kb on - strand at 3202.910 kb on - strand at 3202.993 kb on + strand at 3203.046 kb on + strand at 3203.269 kb on - strand, within DvMF_2537 at 3203.285 kb on - strand, within DvMF_2537 at 3203.363 kb on - strand, within DvMF_2537 at 3203.400 kb on + strand, within DvMF_2537 at 3203.617 kb on - strand, within DvMF_2537 at 3203.652 kb on - strand, within DvMF_2537
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,200,340 - DvMF_2534 0.83 -0.5 3,200,461 + -0.3 3,200,461 + -0.3 3,200,461 + +0.1 3,200,469 - +0.2 3,200,469 - -0.1 3,200,498 - -0.1 3,200,577 + -0.6 3,200,818 + DvMF_2535 0.35 -0.3 3,200,818 + DvMF_2535 0.35 -0.2 3,200,826 - DvMF_2535 0.36 -0.3 3,201,142 - DvMF_2535 0.83 +0.2 3,201,215 + -0.4 3,201,223 - -0.6 3,201,339 + -0.6 3,201,722 - DvMF_2536 0.30 -0.1 3,202,132 - DvMF_2536 0.59 -0.4 3,202,134 + DvMF_2536 0.59 -0.2 3,202,142 - DvMF_2536 0.60 -0.2 3,202,142 - DvMF_2536 0.60 -0.5 3,202,299 + DvMF_2536 0.71 +0.2 3,202,312 + DvMF_2536 0.72 -0.3 3,202,329 + DvMF_2536 0.73 -0.2 3,202,540 - DvMF_2536 0.88 -0.1 3,202,805 - -0.4 3,202,910 - -0.3 3,202,993 + -0.4 3,203,046 + -0.7 3,203,269 - DvMF_2537 0.15 -0.3 3,203,285 - DvMF_2537 0.15 -0.1 3,203,363 - DvMF_2537 0.17 -0.6 3,203,400 + DvMF_2537 0.18 -0.2 3,203,617 - DvMF_2537 0.24 -0.4 3,203,652 - DvMF_2537 0.25 -0.4
Or see this region's nucleotide sequence