Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2373 and DvMF_2374 overlap by 8 nucleotides DvMF_2374 and DvMF_2375 are separated by 199 nucleotides DvMF_2375 and DvMF_2376 are separated by 4 nucleotides
DvMF_2373: DvMF_2373 - multi-sensor hybrid histidine kinase (RefSeq), at 2,994,337 to 2,998,836
_2373
DvMF_2374: DvMF_2374 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 2,998,829 to 3,000,175
_2374
DvMF_2375: DvMF_2375 - protein of unknown function DUF208 (RefSeq), at 3,000,375 to 3,001,025
_2375
DvMF_2376: DvMF_2376 - ribonuclease, Rne/Rng family (RefSeq), at 3,001,030 to 3,002,505
_2376
Position (kb)
2998
2999
3000
3001 Strain fitness (log2 ratio)
-1
0
1 at 2997.938 kb on - strand, within DvMF_2373 at 2997.986 kb on + strand, within DvMF_2373 at 2998.109 kb on - strand, within DvMF_2373 at 2998.195 kb on + strand, within DvMF_2373 at 2998.429 kb on - strand at 2998.528 kb on - strand at 2998.667 kb on - strand at 2998.788 kb on + strand at 2998.850 kb on + strand at 2999.096 kb on + strand, within DvMF_2374 at 2999.205 kb on + strand, within DvMF_2374 at 2999.207 kb on - strand, within DvMF_2374 at 2999.213 kb on - strand, within DvMF_2374 at 2999.593 kb on + strand, within DvMF_2374 at 2999.599 kb on + strand, within DvMF_2374 at 2999.680 kb on + strand, within DvMF_2374 at 2999.699 kb on - strand, within DvMF_2374 at 2999.699 kb on - strand, within DvMF_2374 at 2999.863 kb on + strand, within DvMF_2374 at 2999.956 kb on - strand, within DvMF_2374 at 2999.987 kb on + strand, within DvMF_2374 at 3000.689 kb on + strand, within DvMF_2375 at 3000.702 kb on - strand, within DvMF_2375 at 3000.872 kb on + strand, within DvMF_2375 at 3000.913 kb on + strand, within DvMF_2375
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,997,938 - DvMF_2373 0.80 -0.2 2,997,986 + DvMF_2373 0.81 -0.2 2,998,109 - DvMF_2373 0.84 -0.3 2,998,195 + DvMF_2373 0.86 -0.4 2,998,429 - +0.1 2,998,528 - +0.2 2,998,667 - +0.1 2,998,788 + -0.1 2,998,850 + -0.2 2,999,096 + DvMF_2374 0.20 -0.3 2,999,205 + DvMF_2374 0.28 -0.2 2,999,207 - DvMF_2374 0.28 +0.1 2,999,213 - DvMF_2374 0.29 +0.1 2,999,593 + DvMF_2374 0.57 -0.1 2,999,599 + DvMF_2374 0.57 -0.2 2,999,680 + DvMF_2374 0.63 -0.2 2,999,699 - DvMF_2374 0.65 +0.2 2,999,699 - DvMF_2374 0.65 +0.4 2,999,863 + DvMF_2374 0.77 -0.7 2,999,956 - DvMF_2374 0.84 -0.1 2,999,987 + DvMF_2374 0.86 -0.7 3,000,689 + DvMF_2375 0.48 +0.2 3,000,702 - DvMF_2375 0.50 -0.3 3,000,872 + DvMF_2375 0.76 -0.4 3,000,913 + DvMF_2375 0.83 +0.3
Or see this region's nucleotide sequence