Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1968 and DvMF_1969 are separated by 219 nucleotides DvMF_1969 and DvMF_1970 are separated by 474 nucleotides DvMF_1970 and DvMF_R0052 are separated by 445 nucleotides DvMF_R0052 and DvMF_1971 are separated by 155 nucleotides
DvMF_1968: DvMF_1968 - type I phosphodiesterase/nucleotide pyrophosphatase (RefSeq), at 2,432,710 to 2,434,473
_1968
DvMF_1969: DvMF_1969 - 4-oxalocrotonate tautomerase family enzyme (RefSeq), at 2,434,693 to 2,434,896
_1969
DvMF_1970: DvMF_1970 - hypothetical protein (RefSeq), at 2,435,371 to 2,435,865
_1970
DvMF_R0052: DvMF_R0052 - tRNA-Leu (RefSeq), at 2,436,311 to 2,436,397
_R0052
DvMF_1971: DvMF_1971 - CRISPR-associated helicase Cas3 (RefSeq), at 2,436,553 to 2,438,775
_1971
Position (kb)
2435
2436 Strain fitness (log2 ratio)
-1
0
1 at 2434.374 kb on + strand at 2434.374 kb on + strand at 2434.390 kb on - strand at 2434.482 kb on - strand at 2434.745 kb on - strand, within DvMF_1969 at 2435.138 kb on + strand at 2435.143 kb on + strand at 2435.143 kb on + strand at 2435.176 kb on + strand at 2435.176 kb on + strand at 2435.184 kb on - strand at 2435.184 kb on - strand at 2435.212 kb on - strand at 2435.245 kb on - strand at 2435.330 kb on + strand at 2435.330 kb on + strand at 2435.414 kb on + strand at 2435.427 kb on - strand, within DvMF_1970 at 2435.460 kb on + strand, within DvMF_1970 at 2435.463 kb on - strand, within DvMF_1970 at 2435.596 kb on - strand, within DvMF_1970 at 2435.831 kb on - strand at 2435.885 kb on + strand at 2435.885 kb on + strand at 2435.895 kb on + strand at 2435.913 kb on - strand at 2436.095 kb on + strand at 2436.426 kb on + strand at 2436.434 kb on - strand at 2436.443 kb on - strand at 2436.470 kb on + strand at 2436.478 kb on - strand at 2436.762 kb on + strand at 2436.773 kb on + strand at 2436.845 kb on + strand, within DvMF_1971 at 2436.853 kb on - strand, within DvMF_1971
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,434,374 + -0.3 2,434,374 + -0.3 2,434,390 - -0.3 2,434,482 - -0.2 2,434,745 - DvMF_1969 0.25 -0.4 2,435,138 + -0.2 2,435,143 + -0.1 2,435,143 + +0.0 2,435,176 + -0.7 2,435,176 + -0.5 2,435,184 - -0.6 2,435,184 - -0.7 2,435,212 - -0.5 2,435,245 - +0.3 2,435,330 + -0.1 2,435,330 + -0.2 2,435,414 + -0.2 2,435,427 - DvMF_1970 0.11 -0.3 2,435,460 + DvMF_1970 0.18 -0.2 2,435,463 - DvMF_1970 0.19 -0.2 2,435,596 - DvMF_1970 0.45 -0.0 2,435,831 - -0.5 2,435,885 + +0.1 2,435,885 + +0.3 2,435,895 + -0.4 2,435,913 - -0.5 2,436,095 + -0.4 2,436,426 + +0.1 2,436,434 - -0.1 2,436,443 - -0.8 2,436,470 + -0.6 2,436,478 - -0.2 2,436,762 + +0.4 2,436,773 + -0.2 2,436,845 + DvMF_1971 0.13 +0.2 2,436,853 - DvMF_1971 0.13 +0.3
Or see this region's nucleotide sequence