Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1699 and DvMF_1700 are separated by 209 nucleotides DvMF_1700 and DvMF_1701 are separated by 313 nucleotides
DvMF_1699: DvMF_1699 - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (RefSeq), at 2,072,403 to 2,073,062
_1699
DvMF_1700: DvMF_1700 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 2,073,272 to 2,075,047
_1700
DvMF_1701: DvMF_1701 - MiaB-like tRNA modifying enzyme YliG (RefSeq), at 2,075,361 to 2,076,746
_1701
Position (kb)
2073
2074
2075
2076 Strain fitness (log2 ratio)
-1
0
1 at 2072.409 kb on - strand at 2073.110 kb on - strand at 2073.110 kb on - strand at 2073.228 kb on - strand at 2073.239 kb on - strand at 2073.305 kb on - strand at 2073.717 kb on - strand, within DvMF_1700 at 2073.730 kb on - strand, within DvMF_1700 at 2073.800 kb on + strand, within DvMF_1700 at 2073.812 kb on + strand, within DvMF_1700 at 2074.390 kb on + strand, within DvMF_1700 at 2074.554 kb on - strand, within DvMF_1700 at 2074.636 kb on + strand, within DvMF_1700 at 2074.882 kb on + strand at 2074.963 kb on + strand at 2075.134 kb on - strand at 2075.234 kb on - strand at 2075.336 kb on - strand at 2075.494 kb on - strand at 2075.540 kb on + strand, within DvMF_1701 at 2075.544 kb on - strand, within DvMF_1701 at 2075.548 kb on - strand, within DvMF_1701 at 2075.959 kb on - strand, within DvMF_1701 at 2076.047 kb on - strand, within DvMF_1701
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,072,409 - -0.6 2,073,110 - +0.0 2,073,110 - -0.1 2,073,228 - -0.6 2,073,239 - -0.6 2,073,305 - +0.3 2,073,717 - DvMF_1700 0.25 -0.5 2,073,730 - DvMF_1700 0.26 -0.3 2,073,800 + DvMF_1700 0.30 -0.5 2,073,812 + DvMF_1700 0.30 +0.1 2,074,390 + DvMF_1700 0.63 +0.3 2,074,554 - DvMF_1700 0.72 -0.5 2,074,636 + DvMF_1700 0.77 -0.4 2,074,882 + -0.2 2,074,963 + -0.3 2,075,134 - -0.0 2,075,234 - -0.6 2,075,336 - -0.6 2,075,494 - -0.5 2,075,540 + DvMF_1701 0.13 -0.1 2,075,544 - DvMF_1701 0.13 -0.0 2,075,548 - DvMF_1701 0.13 -0.1 2,075,959 - DvMF_1701 0.43 -0.2 2,076,047 - DvMF_1701 0.49 +0.0
Or see this region's nucleotide sequence