Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0341 and DvMF_0342 are separated by 359 nucleotides DvMF_0342 and DvMF_0343 are separated by 569 nucleotides
DvMF_0341: DvMF_0341 - glycine cleavage system T protein (RefSeq), at 398,287 to 399,375
_0341
DvMF_0342: DvMF_0342 - hypothetical protein (RefSeq), at 399,735 to 401,453
_0342
DvMF_0343: DvMF_0343 - putative GAF sensor protein (RefSeq), at 402,023 to 403,123
_0343
Position (kb) 399
400
401
402 Strain fitness (log2 ratio) -1
0
1 at 398.844 kb on - strand, within DvMF_0341 at 398.871 kb on + strand, within DvMF_0341 at 398.916 kb on + strand, within DvMF_0341 at 398.924 kb on - strand, within DvMF_0341 at 398.924 kb on - strand, within DvMF_0341 at 398.976 kb on - strand, within DvMF_0341 at 399.015 kb on - strand, within DvMF_0341 at 399.072 kb on - strand, within DvMF_0341 at 399.105 kb on + strand, within DvMF_0341 at 399.133 kb on + strand, within DvMF_0341 at 399.166 kb on + strand, within DvMF_0341 at 399.174 kb on - strand, within DvMF_0341 at 399.290 kb on + strand at 399.332 kb on + strand at 399.340 kb on - strand at 399.619 kb on + strand at 399.766 kb on + strand at 399.872 kb on + strand at 400.037 kb on + strand, within DvMF_0342 at 400.037 kb on + strand, within DvMF_0342 at 400.037 kb on + strand, within DvMF_0342 at 400.045 kb on - strand, within DvMF_0342 at 400.045 kb on - strand, within DvMF_0342 at 400.440 kb on + strand, within DvMF_0342 at 400.459 kb on + strand, within DvMF_0342 at 400.550 kb on + strand, within DvMF_0342 at 400.586 kb on - strand, within DvMF_0342 at 400.680 kb on + strand, within DvMF_0342 at 400.718 kb on + strand, within DvMF_0342 at 400.918 kb on - strand, within DvMF_0342 at 401.038 kb on + strand, within DvMF_0342 at 401.046 kb on - strand, within DvMF_0342 at 401.046 kb on - strand, within DvMF_0342 at 401.046 kb on - strand, within DvMF_0342 at 401.046 kb on - strand, within DvMF_0342 at 401.462 kb on - strand at 401.592 kb on + strand at 401.718 kb on - strand at 401.754 kb on + strand at 401.781 kb on - strand at 401.805 kb on + strand at 401.871 kb on - strand at 401.916 kb on - strand at 401.985 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 398,844 - DvMF_0341 0.51 -0.6 398,871 + DvMF_0341 0.54 +0.0 398,916 + DvMF_0341 0.58 -0.4 398,924 - DvMF_0341 0.58 -0.4 398,924 - DvMF_0341 0.58 +0.0 398,976 - DvMF_0341 0.63 -0.4 399,015 - DvMF_0341 0.67 -0.2 399,072 - DvMF_0341 0.72 -0.6 399,105 + DvMF_0341 0.75 -0.2 399,133 + DvMF_0341 0.78 +0.6 399,166 + DvMF_0341 0.81 -0.5 399,174 - DvMF_0341 0.81 -0.0 399,290 + -0.3 399,332 + -0.2 399,340 - -0.4 399,619 + -0.6 399,766 + -0.5 399,872 + -0.4 400,037 + DvMF_0342 0.18 -0.1 400,037 + DvMF_0342 0.18 -0.7 400,037 + DvMF_0342 0.18 +0.3 400,045 - DvMF_0342 0.18 +0.2 400,045 - DvMF_0342 0.18 -0.5 400,440 + DvMF_0342 0.41 -0.1 400,459 + DvMF_0342 0.42 +0.3 400,550 + DvMF_0342 0.47 -0.1 400,586 - DvMF_0342 0.50 -0.2 400,680 + DvMF_0342 0.55 -0.3 400,718 + DvMF_0342 0.57 -0.3 400,918 - DvMF_0342 0.69 +0.0 401,038 + DvMF_0342 0.76 -0.2 401,046 - DvMF_0342 0.76 -0.0 401,046 - DvMF_0342 0.76 -0.1 401,046 - DvMF_0342 0.76 +0.0 401,046 - DvMF_0342 0.76 +0.1 401,462 - -0.2 401,592 + -0.4 401,718 - -0.1 401,754 + -0.1 401,781 - -0.2 401,805 + -0.1 401,871 - -0.1 401,916 - -0.2 401,985 + -1.0
Or see this region's nucleotide sequence