Strain Fitness in Shewanella amazonensis SB2B around Sama_2598

Experiment: Thymidine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymidine
3,103,523	+				-0.1
3,103,523	+				-0.2
3,103,523	+				-1.1
3,103,524	-				-0.6
3,103,524	-				+0.4
3,103,533	+				+0.3
3,103,533	+				-0.4
3,103,533	+				-0.3
3,103,534	-				-1.2
3,103,534	-				+0.7
3,103,539	+				-1.2
3,103,539	+				+1.4
3,103,539	+				-2.4
3,103,595	+				-0.8
3,103,595	+				-0.3
3,103,595	+				+0.5
3,103,596	-				-0.4
3,103,596	-				+0.4
3,103,596	-				-0.4
3,103,615	+				+0.9
3,103,615	+				-2.1
3,103,648	+		Sama_2596	0.12	-0.5
3,103,648	+		Sama_2596	0.12	-0.5
3,103,648	+		Sama_2596	0.12	+0.0
3,103,648	+		Sama_2596	0.12	-0.3
3,103,649	-		Sama_2596	0.12	-0.1
3,103,649	-		Sama_2596	0.12	-0.3
3,103,649	-		Sama_2596	0.12	-0.7
3,103,649	-		Sama_2596	0.12	-0.5
3,103,649	-		Sama_2596	0.12	+1.1
3,103,649	-		Sama_2596	0.12	-0.7
3,103,649	-		Sama_2596	0.12	+0.4
3,103,649	-		Sama_2596	0.12	-0.2
3,103,658	+		Sama_2596	0.14	-1.2
3,103,659	-		Sama_2596	0.14	-0.9
3,103,659	-		Sama_2596	0.14	-1.9
3,103,661	+		Sama_2596	0.15	-1.3
3,103,798	+		Sama_2596	0.45	+0.1
3,103,798	+		Sama_2596	0.45	+0.3
3,103,799	-		Sama_2596	0.46	+0.0
3,103,799	-		Sama_2596	0.46	+1.3
3,103,843	-		Sama_2596	0.55	-0.8
3,103,867	+		Sama_2596	0.61	-1.3
3,103,867	+		Sama_2596	0.61	+2.0
3,103,868	-		Sama_2596	0.61	+0.7
3,103,868	-		Sama_2596	0.61	+0.5
3,103,910	+		Sama_2596	0.70	-0.6
3,103,910	+		Sama_2596	0.70	-0.7
3,103,910	+		Sama_2596	0.70	-1.1
3,103,911	-		Sama_2596	0.70	-0.6
3,103,929	-		Sama_2596	0.74	-0.8
3,104,004	+				-0.7
3,104,044	+				+0.5
3,104,044	+				+1.0
3,104,044	+				-2.4
3,104,044	+				+0.3
3,104,044	+				-0.7
3,104,044	+				+0.1
3,104,045	-				-0.3
3,104,297	-				+0.5
3,104,297	-				-0.0
3,104,317	+				-0.7
3,104,343	+				-0.4
3,104,393	-				+0.1
3,104,414	+				+1.2
3,104,415	-				+0.4
3,104,415	-				+1.2
3,104,415	-				-0.8
3,104,415	-				+0.9
3,104,417	+				+0.2
3,104,417	+				-0.3
3,104,417	+				+0.2
3,104,418	-				+0.4
3,104,418	-				-1.6
3,104,479	-		Sama_2598	0.13	-1.1
3,104,479	-		Sama_2598	0.13	-0.3
3,104,479	-		Sama_2598	0.13	+0.7
3,104,480	+		Sama_2598	0.13	-2.1
3,104,480	+		Sama_2598	0.13	-0.0
3,104,480	+		Sama_2598	0.13	-1.3
3,104,480	+		Sama_2598	0.13	+0.4
3,104,480	+		Sama_2598	0.13	-0.7
3,104,480	+		Sama_2598	0.13	-1.1
3,104,480	+		Sama_2598	0.13	-0.6
3,104,480	+		Sama_2598	0.13	+0.7
3,104,481	-		Sama_2598	0.13	+0.9
3,104,481	-		Sama_2598	0.13	-0.0
3,104,481	-		Sama_2598	0.13	-0.4
3,104,499	+		Sama_2598	0.17	-0.7
3,104,499	+		Sama_2598	0.17	-0.0
3,104,499	+		Sama_2598	0.17	-0.5
3,104,499	+		Sama_2598	0.17	+0.7
3,104,499	+		Sama_2598	0.17	+0.1
3,104,499	+		Sama_2598	0.17	-1.3
3,104,499	+		Sama_2598	0.17	+0.7
3,104,499	+		Sama_2598	0.17	-1.2
3,104,500	-		Sama_2598	0.17	+0.7
3,104,500	-		Sama_2598	0.17	+1.0
3,104,508	+		Sama_2598	0.19	-0.9
3,104,508	+		Sama_2598	0.19	-0.9
3,104,509	-		Sama_2598	0.19	+1.1
3,104,509	-		Sama_2598	0.19	-0.9
3,104,539	+		Sama_2598	0.26	-0.4
3,104,540	-		Sama_2598	0.26	-0.3
3,104,549	+		Sama_2598	0.28	-0.7
3,104,549	+		Sama_2598	0.28	-2.4
3,104,586	+		Sama_2598	0.35	+0.7
3,104,586	+		Sama_2598	0.35	+0.2
3,104,586	+		Sama_2598	0.35	+0.7
3,104,586	+		Sama_2598	0.35	-0.3
3,104,587	-		Sama_2598	0.36	-0.1
3,104,587	-		Sama_2598	0.36	-2.2
3,104,587	-		Sama_2598	0.36	-0.3
3,104,589	-		Sama_2598	0.36	+0.4
3,104,615	+		Sama_2598	0.42	+0.1
3,104,616	-		Sama_2598	0.42	-0.6
3,104,616	-		Sama_2598	0.42	+0.7
3,104,616	-		Sama_2598	0.42	+0.5
3,104,616	-		Sama_2598	0.42	-0.7
3,104,654	-		Sama_2598	0.50	-1.2
3,104,662	-		Sama_2598	0.51	-0.6
3,104,729	+		Sama_2598	0.66	-2.1
3,104,730	-		Sama_2598	0.66	+0.7
3,104,730	-		Sama_2598	0.66	-1.0
3,104,730	-		Sama_2598	0.66	-1.0
3,104,740	+		Sama_2598	0.68	+0.5
3,104,741	-		Sama_2598	0.68	+1.3
3,104,741	-		Sama_2598	0.68	-0.9
3,104,757	-		Sama_2598	0.72	+0.2
3,104,757	-		Sama_2598	0.72	+0.8
3,104,802	-		Sama_2598	0.81	-0.3
3,104,844	-				+0.1
3,104,844	-				-0.1
3,104,869	+				-0.9
3,104,870	-				+1.1
3,104,870	-				-0.1
3,104,870	-				-2.4
3,104,870	-				-2.3
3,104,870	-				+1.5
3,104,870	-				-2.1
3,104,870	-				-0.4
3,104,890	-				+2.3
3,104,912	+				-1.9
3,104,986	-				-0.4
3,105,150	+				+0.7
3,105,151	-				+0.1
3,105,238	+				-0.5
3,105,295	+				+1.7
3,105,296	-				+1.5
3,105,296	-				+0.0
3,105,316	+				+0.1
3,105,317	-				-0.1
3,105,317	-				+0.6
3,105,400	+		Sama_2599	0.15	+0.5
3,105,405	+		Sama_2599	0.15	-1.9
3,105,406	-		Sama_2599	0.15	+0.9
3,105,418	-		Sama_2599	0.16	+0.2
3,105,418	-		Sama_2599	0.16	+0.1
3,105,418	-		Sama_2599	0.16	-0.6
3,105,420	-		Sama_2599	0.17	-0.0
3,105,431	+		Sama_2599	0.18	+0.7
3,105,431	+		Sama_2599	0.18	-0.0
3,105,432	-		Sama_2599	0.18	-0.7
3,105,432	-		Sama_2599	0.18	-0.5
3,105,432	-		Sama_2599	0.18	-0.3
3,105,432	-		Sama_2599	0.18	-0.3
3,105,432	-		Sama_2599	0.18	-0.2
3,105,450	-		Sama_2599	0.20	-0.5
3,105,450	-		Sama_2599	0.20	+0.8
3,105,450	-		Sama_2599	0.20	+1.6
3,105,450	-		Sama_2599	0.20	+0.4
3,105,450	-		Sama_2599	0.20	-0.9
3,105,480	+		Sama_2599	0.23	+0.4
3,105,480	+		Sama_2599	0.23	+0.2
3,105,480	+		Sama_2599	0.23	+0.5
3,105,480	+		Sama_2599	0.23	+0.1
3,105,480	+		Sama_2599	0.23	-0.9
3,105,481	-		Sama_2599	0.23	+0.7
3,105,481	-		Sama_2599	0.23	+1.4
3,105,583	+		Sama_2599	0.33	+0.5
3,105,583	+		Sama_2599	0.33	-0.3
3,105,583	+		Sama_2599	0.33	-0.5
3,105,583	+		Sama_2599	0.33	-1.3
3,105,583	+		Sama_2599	0.33	+1.1
3,105,583	+		Sama_2599	0.33	+0.7
3,105,583	+		Sama_2599	0.33	-0.1
3,105,583	+		Sama_2599	0.33	+0.5
3,105,584	-		Sama_2599	0.33	+0.7
3,105,584	-		Sama_2599	0.33	-0.3
3,105,584	-		Sama_2599	0.33	+1.1
3,105,584	-		Sama_2599	0.33	+0.2
3,105,584	-		Sama_2599	0.33	+0.4
3,105,584	-		Sama_2599	0.33	-0.9
3,105,584	-		Sama_2599	0.33	-1.1
3,105,584	-		Sama_2599	0.33	-0.9
3,105,587	+		Sama_2599	0.33	-0.3
3,105,587	+		Sama_2599	0.33	+1.3
3,105,587	+		Sama_2599	0.33	-0.3
3,105,587	+		Sama_2599	0.33	+0.8
3,105,587	+		Sama_2599	0.33	-0.7
3,105,588	-		Sama_2599	0.33	-1.0
3,105,593	-		Sama_2599	0.34	+0.4
3,105,593	-		Sama_2599	0.34	+0.5
3,105,593	-		Sama_2599	0.34	+0.3
3,105,626	-		Sama_2599	0.37	+0.3
3,105,626	-		Sama_2599	0.37	-1.2
3,105,699	+		Sama_2599	0.45	-0.0
3,105,700	-		Sama_2599	0.45	+0.4
3,105,700	-		Sama_2599	0.45	+0.1
3,105,700	-		Sama_2599	0.45	-0.3
3,105,700	-		Sama_2599	0.45	-0.8
3,105,734	+		Sama_2599	0.48	+1.1
3,105,734	+		Sama_2599	0.48	-0.2
3,105,734	+		Sama_2599	0.48	-0.5
3,105,734	+		Sama_2599	0.48	+0.8
3,105,734	+		Sama_2599	0.48	-0.3
3,105,734	+		Sama_2599	0.48	-0.9
3,105,735	-		Sama_2599	0.48	-0.7
3,105,738	+		Sama_2599	0.48	-0.2
3,105,738	+		Sama_2599	0.48	-0.0
3,105,738	+		Sama_2599	0.48	+0.5
3,105,739	-		Sama_2599	0.49	-1.7
3,105,739	-		Sama_2599	0.49	-0.7
3,105,739	-		Sama_2599	0.49	+0.1
3,105,739	-		Sama_2599	0.49	-2.3
3,105,767	+		Sama_2599	0.51	-0.1
3,105,768	-		Sama_2599	0.51	-0.7
3,105,783	+		Sama_2599	0.53	+0.9
3,105,784	-		Sama_2599	0.53	-0.9
3,105,786	+		Sama_2599	0.53	+0.7
3,105,786	+		Sama_2599	0.53	-0.6
3,105,786	+		Sama_2599	0.53	+0.1
3,105,786	+		Sama_2599	0.53	+0.4
3,105,786	+		Sama_2599	0.53	-0.3
3,105,786	+		Sama_2599	0.53	-0.2
3,105,787	-		Sama_2599	0.53	+1.0
3,105,787	-		Sama_2599	0.53	-0.3
3,105,787	-		Sama_2599	0.53	+0.1
3,105,787	-		Sama_2599	0.53	+1.0
3,105,787	-		Sama_2599	0.53	+0.0
3,105,855	+		Sama_2599	0.60	+0.4
3,105,855	+		Sama_2599	0.60	-0.0
3,105,885	-		Sama_2599	0.63	+1.0
3,105,885	-		Sama_2599	0.63	-1.3
3,105,885	-		Sama_2599	0.63	+0.1
3,105,885	-		Sama_2599	0.63	-0.2