Strain Fitness in Shewanella loihica PV-4 around Shew_3687

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,389,716	+		Shew_3685	0.52	+0.4
4,389,809	-		Shew_3685	0.65	-1.0
4,389,929	-		Shew_3685	0.81	+0.7
4,390,248	-		Shew_3686	0.34	+0.5
4,390,248	-		Shew_3686	0.34	+0.4
4,390,480	+		Shew_3686	0.74	+0.8
4,390,531	+		Shew_3686	0.82	+0.7
4,390,574	-		Shew_3686	0.90	-0.9
4,390,574	-		Shew_3686	0.90	+0.2
4,390,652	-				+0.8
4,390,659	+				-0.3
4,390,802	-				+0.3
4,390,972	-		Shew_3687	0.18	+0.9
4,391,006	+		Shew_3687	0.20	+0.3
4,391,016	+		Shew_3687	0.20	+0.9
4,391,516	+		Shew_3687	0.48	+1.5
4,391,670	+		Shew_3687	0.57	+0.5
4,391,875	+		Shew_3687	0.68	-0.2
4,391,875	+		Shew_3687	0.68	+1.0
4,391,932	-		Shew_3687	0.71	+0.4
4,392,127	-		Shew_3687	0.82	+0.4
4,392,133	-		Shew_3687	0.82	+0.5
4,392,133	-		Shew_3687	0.82	+0.6
4,392,316	+				+1.1
4,392,337	-				+0.3
4,392,341	+				+0.5
4,392,431	-				-0.8
4,392,642	+		Shew_3688	0.13	-0.0
4,392,660	+		Shew_3688	0.15	+0.5
4,392,845	+		Shew_3688	0.34	-1.0
4,392,907	-		Shew_3688	0.40	+0.5
4,392,963	+		Shew_3688	0.46	+0.2
4,393,091	-		Shew_3688	0.59	+0.2
4,393,235	-		Shew_3688	0.74	+0.5
4,393,238	+		Shew_3688	0.74	-0.1