Strain Fitness in Shewanella loihica PV-4 around Shew_3545

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,232,002	-		Shew_3544	0.34	-0.1
4,232,031	+		Shew_3544	0.37	+0.2
4,232,170	+		Shew_3544	0.51	-0.9
4,232,170	+		Shew_3544	0.51	-1.7
4,232,189	+		Shew_3544	0.53	-0.9
4,232,287	+		Shew_3544	0.64	-0.2
4,232,295	-		Shew_3544	0.65	+0.1
4,232,408	+		Shew_3544	0.76	-0.1
4,232,521	+		Shew_3544	0.88	-0.2
4,232,932	-	rbn	Shew_3545	0.35	+0.0
4,233,053	+	rbn	Shew_3545	0.50	-0.5
4,233,099	+	rbn	Shew_3545	0.55	-0.6
4,233,235	+	rbn	Shew_3545	0.71	-0.2
4,233,235	+	rbn	Shew_3545	0.71	-0.2
4,233,243	-	rbn	Shew_3545	0.72	-0.1
4,233,271	+	rbn	Shew_3545	0.75	-0.1
4,233,371	+	rbn	Shew_3545	0.87	+1.3
4,233,379	-	rbn	Shew_3545	0.88	-0.4
4,233,416	-				+0.8
4,233,701	+		Shew_3546	0.27	+0.4
4,233,740	+		Shew_3546	0.45	-0.4
4,233,776	-		Shew_3546	0.61	+0.5
4,233,808	-		Shew_3546	0.75	+0.1
4,233,847	+				-0.9