Strain Fitness in Shewanella loihica PV-4 around Shew_3162

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,761,998	+				+0.7
3,761,998	+				+0.0
3,762,010	+				+0.1
3,762,012	+				+0.3
3,762,012	+				-1.0
3,762,012	+				+0.3
3,762,012	+				+1.0
3,762,012	+				-0.2
3,762,012	+				-0.0
3,762,012	+				+1.3
3,762,015	+				+0.2
3,762,018	-				-0.1
3,762,020	+				+0.1
3,762,020	+				-0.3
3,762,020	+				+0.0
3,762,020	+				+0.8
3,762,020	+				+0.2
3,762,020	+				-0.5
3,762,020	+				+0.6
3,762,020	+				+0.8
3,762,020	+				-0.3
3,762,020	+				+0.1
3,762,020	+				+0.2
3,762,020	+				+0.4
3,762,020	+				-0.4
3,762,020	+				-0.0
3,762,020	+				+0.9
3,762,020	+				+0.1
3,762,020	+				+0.4
3,762,020	+				-0.6
3,762,020	+				+0.4
3,762,020	+				+0.1
3,762,020	+				-0.1
3,762,021	+				+0.1
3,762,021	+				-0.2
3,762,021	+				+0.5
3,762,021	+				+0.5
3,762,021	+				+0.5
3,762,021	+				+0.3
3,762,021	+				-0.4
3,762,021	+				-0.4
3,762,021	+				+0.8
3,762,026	+				-1.6
3,762,026	+				-0.1
3,762,026	+				-0.1
3,762,026	+				+0.3
3,762,028	-				-0.8
3,762,028	-				+0.4
3,762,028	-				-0.0
3,762,028	-				-0.1
3,762,028	-				+1.0
3,762,028	-				-0.3
3,762,028	-				+0.2
3,762,028	+				+0.9
3,762,028	+				+0.2
3,762,028	-				-1.8
3,762,028	-				+1.0
3,762,028	-				+0.2
3,762,028	+				+0.6
3,762,028	-				-0.1
3,762,028	-				+0.6
3,762,028	-				+0.0
3,762,028	-				+0.1
3,762,028	-				+0.9
3,762,028	-				-1.5
3,762,028	-				+0.3
3,762,029	-				-0.1
3,762,029	-				+0.1
3,762,029	-				+0.0
3,762,029	-				-0.3
3,762,029	-				+0.0
3,762,029	-				+0.7
3,762,029	-				+0.6
3,762,029	-				+0.1
3,762,031	+				-0.0
3,762,032	-				+0.6
3,762,032	-				+0.1
3,762,032	-				+0.4
3,762,034	-				+0.1
3,762,036	+				+0.3
3,762,036	+				+0.2
3,762,036	+				-0.8
3,762,043	+				-0.2
3,762,043	+				+0.4
3,762,043	+				-0.7
3,762,043	-				+0.1
3,762,043	+				-0.3
3,762,043	+				+0.1
3,762,043	+				-0.1
3,762,044	-				+0.7
3,762,044	-				-0.8
3,762,051	-				+0.8
3,762,051	-				-0.2
3,762,051	-				-0.3
3,762,051	-				+0.2
3,762,051	-				-0.9
3,762,077	-				-0.6
3,762,082	+				-0.0
3,762,155	+		Shew_3161	0.16	-0.1
3,762,163	+		Shew_3161	0.16	+0.4
3,762,173	+		Shew_3161	0.17	+0.4
3,762,181	-		Shew_3161	0.18	-0.0
3,762,181	-		Shew_3161	0.18	+0.2
3,762,189	-		Shew_3161	0.19	+0.1
3,762,286	-		Shew_3161	0.29	-1.0
3,762,301	+		Shew_3161	0.31	+0.2
3,762,314	-		Shew_3161	0.32	-0.4
3,762,363	+		Shew_3161	0.37	+0.7
3,762,448	+		Shew_3161	0.46	+0.2
3,762,456	-		Shew_3161	0.47	+0.8
3,762,456	-		Shew_3161	0.47	-0.2
3,762,475	-		Shew_3161	0.49	+0.1
3,762,551	-		Shew_3161	0.57	-0.0
3,762,565	-		Shew_3161	0.59	+0.2
3,762,578	+		Shew_3161	0.60	+0.1
3,762,586	-		Shew_3161	0.61	-0.2
3,762,887	+				+0.8
3,762,895	-				-0.0
3,762,902	-				+0.2
3,762,902	-				+0.4
3,762,902	-				+0.3
3,763,392	+		Shew_3162	0.11	+0.2
3,763,400	-		Shew_3162	0.11	+0.1
3,763,563	-		Shew_3162	0.16	+0.4
3,763,570	+		Shew_3162	0.16	-0.3
3,763,740	-		Shew_3162	0.21	+0.3
3,764,077	+		Shew_3162	0.30	+0.3
3,764,231	-		Shew_3162	0.35	-0.4
3,764,231	-		Shew_3162	0.35	-0.7
3,764,250	+		Shew_3162	0.35	-0.7
3,764,425	+		Shew_3162	0.40	+0.1
3,764,573	-		Shew_3162	0.44	+0.5
3,764,580	+		Shew_3162	0.44	+0.1
3,764,600	-		Shew_3162	0.45	+0.1
3,764,765	-		Shew_3162	0.50	+0.3
3,764,790	-		Shew_3162	0.50	-0.1
3,764,796	-		Shew_3162	0.51	+0.3
3,765,248	+		Shew_3162	0.63	-0.0
3,765,251	-		Shew_3162	0.63	-0.8
3,765,658	+		Shew_3162	0.75	+0.1
3,765,682	-		Shew_3162	0.75	+0.1
3,765,803	+		Shew_3162	0.79	-0.0
3,766,045	+		Shew_3162	0.86	-0.2
3,766,071	-		Shew_3162	0.86	+0.4
3,766,139	-		Shew_3162	0.88	+0.9
3,766,173	+		Shew_3162	0.89	-0.0
3,766,181	-		Shew_3162	0.89	+0.2
3,766,472	+				-0.6
3,766,478	+				-0.1
3,766,635	+				-0.3
3,766,883	-				+1.8
3,767,222	-		Shew_3163	0.38	-1.1
3,767,369	-		Shew_3163	0.51	+1.5
3,767,375	+		Shew_3163	0.52	-0.3