Strain Fitness in Shewanella loihica PV-4 around Shew_3006

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,568,784	+		Shew_3005	0.29	+0.1
3,568,784	+		Shew_3005	0.29	-0.1
3,568,805	+		Shew_3005	0.30	+1.3
3,569,098	-		Shew_3005	0.51	+1.0
3,569,225	+		Shew_3005	0.60	+0.5
3,569,225	+		Shew_3005	0.60	+0.7
3,569,579	-		Shew_3005	0.86	+0.8
3,569,803	-				+1.2
3,569,958	-		Shew_3006	0.32	+0.1
3,570,146	-		Shew_3006	0.65	-0.0
3,570,292	+				-0.3
3,570,300	-				+0.3
3,570,389	-				+0.1
3,570,407	-				+0.3
3,570,614	+				+0.7
3,570,651	+				+1.2
3,570,659	-				+0.7
3,570,659	-				-0.2
3,570,659	-				-0.2
3,570,694	+				+0.6
3,570,802	+		Shew_3007	0.19	-0.3
3,570,810	-		Shew_3007	0.20	+0.3
3,570,862	+		Shew_3007	0.26	-0.1
3,570,947	-		Shew_3007	0.35	+0.8
3,571,345	+		Shew_3007	0.80	-0.0