Strain Fitness in Shewanella loihica PV-4 around Shew_2600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,065,479	+				+0.2
3,065,634	+				+0.2
3,065,654	+				+0.4
3,065,670	-				+0.1
3,066,189	-				-0.3
3,066,335	+				+0.4
3,066,429	+				-0.9
3,066,560	-		Shew_2600	0.26	+0.1
3,066,589	-		Shew_2600	0.34	-0.7
3,066,619	-		Shew_2600	0.43	+0.2
3,066,619	-		Shew_2600	0.43	-0.2
3,066,626	+		Shew_2600	0.45	-0.7
3,066,653	-		Shew_2600	0.53	-0.8
3,066,720	+		Shew_2600	0.73	+0.3
3,066,735	-		Shew_2600	0.77	+0.4
3,066,741	+		Shew_2600	0.79	-0.5
3,066,749	-		Shew_2600	0.81	-1.3
3,066,749	-		Shew_2600	0.81	+0.4
3,066,827	+				-0.1
3,066,827	+				-0.3
3,066,835	-				-0.1
3,066,835	-				-0.3
3,066,835	-				+0.2
3,066,845	-				+0.5
3,066,883	+				-0.5
3,066,886	-				-0.3
3,066,891	-				-0.4
3,066,891	-				-0.3
3,066,891	-				-0.2
3,066,891	-				-0.6
3,066,901	-				+0.5
3,066,932	+				-1.3
3,066,935	+				+0.0
3,066,973	+		Shew_2601	0.12	+2.4
3,066,981	-		Shew_2601	0.14	+0.2
3,066,981	-		Shew_2601	0.14	+0.3
3,067,016	+		Shew_2601	0.23	-0.2
3,067,141	+		Shew_2601	0.54	+0.0
3,067,141	+		Shew_2601	0.54	+0.4
3,067,185	+		Shew_2601	0.64	+0.3
3,067,185	+		Shew_2601	0.64	+0.8
3,067,185	-		Shew_2601	0.64	+0.4
3,067,193	-		Shew_2601	0.66	-0.3
3,067,193	-		Shew_2601	0.66	+0.4
3,067,283	+		Shew_2601	0.88	+0.2
3,067,324	+				-1.4
3,067,360	-				+0.0
3,067,380	+				-0.0
3,067,492	-				+0.1
3,067,498	-				-0.1
3,067,556	+				-0.5
3,067,572	-				+1.1
3,067,624	+				-0.1
3,067,665	-				-0.6
3,067,679	-				-0.2
3,067,709	+				+1.1
3,067,724	+				-1.1
3,067,747	+				-1.0
3,067,786	+				+0.3
3,067,794	-				-0.0
3,067,807	+				-0.0