Strain Fitness in Shewanella loihica PV-4 around Shew_2397
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,810,883 | - | -0.0 | |||
2,810,913 | + | +0.8 | |||
2,811,173 | + | -0.1 | |||
2,811,213 | + | Shew_2396 | 0.11 | +1.9 | |
2,811,228 | - | Shew_2396 | 0.17 | +0.0 | |
2,811,625 | + | Shew_2397 | 0.12 | -0.7 | |
2,812,165 | + | Shew_2397 | 0.71 | -0.7 | |
2,812,218 | - | Shew_2397 | 0.76 | +0.1 | |
2,812,568 | + | +0.5 | |||
2,812,594 | - | +0.8 | |||
2,812,622 | + | Shew_2398 | 0.11 | +0.2 | |
2,813,175 | - | Shew_2398 | 0.58 | +0.2 | |
2,813,258 | + | Shew_2398 | 0.65 | +0.3 | |
2,813,266 | - | Shew_2398 | 0.66 | +0.5 |
Or see this region's nucleotide sequence