Strain Fitness in Shewanella loihica PV-4 around Shew_1875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,157,061	+				+0.6
2,157,076	-				+1.2
2,157,165	+				+0.2
2,157,298	-				-0.6
2,157,298	-				+0.3
2,157,317	+				-0.5
2,157,368	-				+0.8
2,157,611	+				+1.1
2,157,768	-				-0.9
2,157,839	+				+0.1
2,158,066	-				+0.1
2,158,128	+				-0.9
2,158,563	-		Shew_1875	0.38	+0.7
2,158,749	+		Shew_1875	0.50	+0.4
2,158,749	+		Shew_1875	0.50	+1.0
2,159,113	-		Shew_1875	0.74	+0.2
2,159,353	-		Shew_1875	0.89	+0.5
2,159,366	-				+0.2
2,159,509	+				+1.1
2,159,591	+				+0.2
2,159,599	-				-0.1
2,160,005	-				+0.1
2,160,037	+				-0.3