Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0795 and Shew_0796 are separated by 302 nucleotides Shew_0796 and Shew_0797 are separated by 103 nucleotides Shew_0797 and Shew_0798 are separated by 554 nucleotides
Shew_0795: Shew_0795 - hypothetical protein (RefSeq), at 908,006 to 908,410
_0795
Shew_0796: Shew_0796 - hypothetical protein (RefSeq), at 908,713 to 908,910
_0796
Shew_0797: Shew_0797 - hypothetical protein (RefSeq), at 909,014 to 910,432
_0797
Shew_0798: Shew_0798 - hypothetical protein (RefSeq), at 910,987 to 911,424
_0798
Position (kb) 909
910
911 Strain fitness (log2 ratio) -1
0
1
2 at 908.089 kb on + strand, within Shew_0795 at 908.332 kb on + strand, within Shew_0795 at 908.412 kb on + strand at 908.510 kb on - strand at 908.611 kb on - strand at 908.710 kb on + strand at 908.710 kb on + strand at 908.718 kb on - strand at 908.918 kb on + strand at 908.926 kb on - strand at 908.936 kb on + strand at 908.975 kb on - strand at 909.068 kb on + strand at 909.309 kb on + strand, within Shew_0797 at 909.341 kb on + strand, within Shew_0797 at 909.366 kb on + strand, within Shew_0797 at 909.810 kb on + strand, within Shew_0797 at 910.036 kb on - strand, within Shew_0797 at 910.137 kb on + strand, within Shew_0797 at 910.137 kb on + strand, within Shew_0797 at 910.145 kb on - strand, within Shew_0797 at 910.589 kb on + strand at 910.691 kb on - strand at 910.910 kb on + strand at 911.039 kb on + strand, within Shew_0798 at 911.147 kb on + strand, within Shew_0798 at 911.155 kb on - strand, within Shew_0798 at 911.155 kb on - strand, within Shew_0798 at 911.252 kb on - strand, within Shew_0798
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 908,089 + Shew_0795 0.20 +0.6 908,332 + Shew_0795 0.80 -1.6 908,412 + +0.9 908,510 - +0.6 908,611 - +0.3 908,710 + +0.1 908,710 + +0.2 908,718 - +0.1 908,918 + -0.2 908,926 - +0.2 908,936 + -0.1 908,975 - +0.5 909,068 + +0.5 909,309 + Shew_0797 0.21 +0.4 909,341 + Shew_0797 0.23 +0.2 909,366 + Shew_0797 0.25 +2.1 909,810 + Shew_0797 0.56 +0.6 910,036 - Shew_0797 0.72 +0.4 910,137 + Shew_0797 0.79 +0.3 910,137 + Shew_0797 0.79 +0.4 910,145 - Shew_0797 0.80 +0.6 910,589 + +0.2 910,691 - -0.3 910,910 + +0.2 911,039 + Shew_0798 0.12 +0.1 911,147 + Shew_0798 0.37 +1.3 911,155 - Shew_0798 0.38 +0.3 911,155 - Shew_0798 0.38 +0.1 911,252 - Shew_0798 0.61 -1.3
Or see this region's nucleotide sequence