Strain Fitness in Shewanella loihica PV-4 around Shew_0782
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
895,804 | + | Shew_0781 | 0.80 | -0.1 | |
895,853 | + | Shew_0781 | 0.81 | +0.1 | |
896,086 | - | Shew_0781 | 0.87 | +0.1 | |
896,151 | - | Shew_0781 | 0.89 | -0.3 | |
896,168 | - | Shew_0781 | 0.89 | +0.0 | |
896,219 | - | -0.7 | |||
896,504 | + | -0.9 | |||
896,800 | - | -1.0 | |||
896,973 | + | Shew_0782 | 0.39 | +0.9 | |
897,066 | + | Shew_0782 | 0.59 | +0.9 | |
897,073 | - | Shew_0782 | 0.60 | +0.2 | |
897,398 | - | +0.1 |
Or see this region's nucleotide sequence