Strain Fitness in Shewanella loihica PV-4 around Shew_0516
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
584,779 | + | Shew_0515 | 0.49 | -1.1 | |
584,835 | + | Shew_0515 | 0.52 | -0.2 | |
585,062 | - | Shew_0515 | 0.66 | +0.3 | |
585,095 | + | Shew_0515 | 0.67 | +0.4 | |
585,095 | + | Shew_0515 | 0.67 | +1.2 | |
585,095 | + | Shew_0515 | 0.67 | +0.3 | |
585,603 | - | -0.3 | |||
585,951 | + | Shew_0516 | 0.71 | +1.6 | |
585,951 | + | Shew_0516 | 0.71 | +0.4 | |
585,975 | + | Shew_0516 | 0.78 | -0.2 | |
586,367 | + | -0.1 | |||
586,966 | + | Shew_0517 | 0.34 | +0.0 |
Or see this region's nucleotide sequence