Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0282 and Shew_0283 are separated by 115 nucleotides Shew_0283 and Shew_0284 are separated by 329 nucleotides
Shew_0282: Shew_0282 - phospholipid/glycerol acyltransferase (RefSeq), at 299,316 to 300,200
_0282
Shew_0283: Shew_0283 - Mg chelatase, subunit ChlI (RefSeq), at 300,316 to 301,836
_0283
Shew_0284: Shew_0284 - hypothetical protein (RefSeq), at 302,166 to 303,491
_0284
Position (kb) 300
301
302 Strain fitness (log2 ratio) -2
-1
0
1 at 299.604 kb on - strand, within Shew_0282 at 299.796 kb on + strand, within Shew_0282 at 299.825 kb on - strand, within Shew_0282 at 300.258 kb on + strand at 300.289 kb on - strand at 300.323 kb on + strand at 300.416 kb on - strand at 300.527 kb on - strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.963 kb on - strand, within Shew_0283 at 301.014 kb on + strand, within Shew_0283 at 301.022 kb on - strand, within Shew_0283 at 301.279 kb on - strand, within Shew_0283 at 301.347 kb on - strand, within Shew_0283 at 301.484 kb on + strand, within Shew_0283 at 301.683 kb on - strand, within Shew_0283 at 301.718 kb on + strand at 301.737 kb on + strand at 302.071 kb on + strand at 302.139 kb on - strand at 302.139 kb on - strand at 302.468 kb on + strand, within Shew_0284 at 302.481 kb on - strand, within Shew_0284 at 302.481 kb on - strand, within Shew_0284 at 302.621 kb on + strand, within Shew_0284 at 302.650 kb on - strand, within Shew_0284 at 302.698 kb on + strand, within Shew_0284
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 299,604 - Shew_0282 0.33 -0.6 299,796 + Shew_0282 0.54 +0.7 299,825 - Shew_0282 0.58 -1.3 300,258 + +0.6 300,289 - +1.6 300,323 + +0.3 300,416 - -0.7 300,527 - Shew_0283 0.14 +0.8 300,552 + Shew_0283 0.16 +0.8 300,552 + Shew_0283 0.16 +0.3 300,963 - Shew_0283 0.43 -0.0 301,014 + Shew_0283 0.46 +0.1 301,022 - Shew_0283 0.46 +0.2 301,279 - Shew_0283 0.63 +0.1 301,347 - Shew_0283 0.68 -0.2 301,484 + Shew_0283 0.77 -0.2 301,683 - Shew_0283 0.90 +0.3 301,718 + -1.8 301,737 + +0.2 302,071 + -0.1 302,139 - +0.7 302,139 - -0.0 302,468 + Shew_0284 0.23 -1.2 302,481 - Shew_0284 0.24 -0.5 302,481 - Shew_0284 0.24 +0.5 302,621 + Shew_0284 0.34 -0.3 302,650 - Shew_0284 0.37 +0.5 302,698 + Shew_0284 0.40 +0.7
Or see this region's nucleotide sequence