Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0266 and Shew_0267 are separated by 69 nucleotides Shew_0267 and Shew_0268 are separated by 186 nucleotides Shew_0268 and Shew_0269 are separated by 96 nucleotides Shew_0269 and Shew_0270 are separated by 68 nucleotides Shew_0270 and Shew_0271 are separated by 140 nucleotides
Shew_0266: Shew_0266 - hypothetical protein (RefSeq), at 284,873 to 285,085
_0266
Shew_0267: Shew_0267 - hypothetical protein (RefSeq), at 285,155 to 285,361
_0267
Shew_0268: Shew_0268 - transcriptional antiterminator, Rof (RefSeq), at 285,548 to 285,829
_0268
Shew_0269: Shew_0269 - hypothetical protein (RefSeq), at 285,926 to 286,813
_0269
Shew_0270: Shew_0270 - hypothetical protein (RefSeq), at 286,882 to 287,517
_0270
Shew_0271: Shew_0271 - phospholipase (RefSeq), at 287,658 to 289,007
_0271
Position (kb) 285
286
287 Strain fitness (log2 ratio) -1
0
1 at 285.085 kb on + strand at 285.607 kb on + strand, within Shew_0268 at 285.731 kb on - strand, within Shew_0268 at 285.746 kb on - strand, within Shew_0268 at 285.765 kb on + strand, within Shew_0268 at 285.829 kb on - strand at 286.022 kb on - strand, within Shew_0269 at 286.249 kb on + strand, within Shew_0269 at 286.347 kb on + strand, within Shew_0269 at 286.624 kb on + strand, within Shew_0269 at 287.616 kb on + strand at 287.697 kb on + strand at 287.697 kb on + strand at 287.705 kb on - strand at 287.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 285,085 + +0.1 285,607 + Shew_0268 0.21 +0.2 285,731 - Shew_0268 0.65 -0.4 285,746 - Shew_0268 0.70 +0.7 285,765 + Shew_0268 0.77 -0.1 285,829 - -0.0 286,022 - Shew_0269 0.11 +1.2 286,249 + Shew_0269 0.36 +0.6 286,347 + Shew_0269 0.47 +0.9 286,624 + Shew_0269 0.79 +0.0 287,616 + -0.5 287,697 + +0.5 287,697 + -0.7 287,705 - -0.2 287,737 - +0.8
Or see this region's nucleotide sequence