Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4156 and Dshi_4157 are separated by 148 nucleotides Dshi_4157 and Dshi_4158 are separated by 78 nucleotides Dshi_4158 and Dshi_4159 are separated by 121 nucleotides
Dshi_4156: Dshi_4156 - GAF modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 1,936 to 3,684
_4156
Dshi_4157: Dshi_4157 - monooxygenase protein, putative (RefSeq), at 3,833 to 5,632
_4157
Dshi_4158: Dshi_4158 - acetoin reductase (RefSeq), at 5,711 to 6,484
_4158
Dshi_4159: Dshi_4159 - Alcohol dehydrogenase GroES domain protein (RefSeq), at 6,606 to 7,658
_4159
Position (kb) 3
4
5
6 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 3.048 kb on - strand, within Dshi_4156 at 3.129 kb on - strand, within Dshi_4156 at 3.159 kb on - strand, within Dshi_4156 at 3.383 kb on + strand, within Dshi_4156 at 3.497 kb on - strand, within Dshi_4156 at 3.626 kb on - strand at 3.681 kb on - strand at 3.857 kb on - strand at 3.976 kb on + strand at 4.027 kb on + strand, within Dshi_4157 at 4.150 kb on - strand, within Dshi_4157 at 4.480 kb on + strand, within Dshi_4157 at 4.488 kb on - strand, within Dshi_4157 at 4.501 kb on - strand, within Dshi_4157 at 4.560 kb on + strand, within Dshi_4157 at 4.568 kb on - strand, within Dshi_4157 at 4.703 kb on - strand, within Dshi_4157 at 4.754 kb on + strand, within Dshi_4157 at 4.762 kb on - strand, within Dshi_4157 at 4.765 kb on + strand, within Dshi_4157 at 4.783 kb on - strand, within Dshi_4157 at 4.884 kb on - strand, within Dshi_4157 at 4.952 kb on + strand at 4.974 kb on + strand, within Dshi_4157 at 5.157 kb on + strand, within Dshi_4157 at 5.165 kb on - strand, within Dshi_4157 at 5.253 kb on + strand, within Dshi_4157 at 5.386 kb on + strand, within Dshi_4157 at 5.410 kb on + strand, within Dshi_4157 at 5.433 kb on + strand, within Dshi_4157 at 5.722 kb on + strand at 5.722 kb on + strand at 5.730 kb on - strand at 5.934 kb on + strand, within Dshi_4158 at 6.023 kb on + strand, within Dshi_4158 at 6.064 kb on - strand, within Dshi_4158 at 6.330 kb on - strand, within Dshi_4158 at 6.571 kb on - strand at 6.586 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 3,048 - Dshi_4156 0.64 +0.6 3,129 - Dshi_4156 0.68 -0.3 3,159 - Dshi_4156 0.70 +1.3 3,383 + Dshi_4156 0.83 +1.3 3,497 - Dshi_4156 0.89 +1.3 3,626 - +4.3 3,681 - +3.9 3,857 - +1.3 3,976 + +0.3 4,027 + Dshi_4157 0.11 +0.3 4,150 - Dshi_4157 0.18 +1.0 4,480 + Dshi_4157 0.36 -1.2 4,488 - Dshi_4157 0.36 +0.3 4,501 - Dshi_4157 0.37 -0.5 4,560 + Dshi_4157 0.40 +3.0 4,568 - Dshi_4157 0.41 -0.7 4,703 - Dshi_4157 0.48 -1.2 4,754 + Dshi_4157 0.51 -1.4 4,762 - Dshi_4157 0.52 -0.0 4,765 + Dshi_4157 0.52 -1.0 4,783 - Dshi_4157 0.53 -1.4 4,884 - Dshi_4157 0.58 +0.3 4,952 + +1.6 4,974 + Dshi_4157 0.63 -0.3 5,157 + Dshi_4157 0.74 +3.3 5,165 - Dshi_4157 0.74 -1.6 5,253 + Dshi_4157 0.79 -0.0 5,386 + Dshi_4157 0.86 -0.9 5,410 + Dshi_4157 0.88 -1.5 5,433 + Dshi_4157 0.89 +0.3 5,722 + +3.9 5,722 + -1.8 5,730 - -0.9 5,934 + Dshi_4158 0.29 +2.0 6,023 + Dshi_4158 0.40 -0.0 6,064 - Dshi_4158 0.46 -0.5 6,330 - Dshi_4158 0.80 -0.7 6,571 - +0.3 6,586 + +1.3
Or see this region's nucleotide sequence