Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4067

Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.0001 mg/ml
49	+				+0.5
228	-		Dshi_4067	0.27	+3.3
481	-		Dshi_4067	0.64	-0.4
545	-		Dshi_4067	0.73	+0.3
552	-		Dshi_4067	0.74	+3.3
553	-		Dshi_4067	0.74	-0.0
599	-		Dshi_4067	0.81	+0.7
682	-				-1.8
689	-				+3.5
791	-				-1.7
803	+				-2.4
861	+				+1.6
862	-				-0.6
869	-				-1.9
880	+				+0.9
880	+				+2.3
880	+				-1.9
884	+				-1.6
902	+				-0.3
903	-				-1.3
908	-				-1.9
913	-				-2.7
920	-				-1.2
927	-				+2.9
942	-				-0.8
955	+				+2.1
955	+				+1.6
960	+				-0.9
960	+				+1.8
963	+				+0.0
963	-				+1.3
965	+				+1.3
965	+				-2.4
971	+				-0.0
973	-				-1.4
973	-				+1.3
1,039	+				+1.3
1,039	+				-0.3
1,039	+				-1.9
1,039	+				+4.6
1,040	-				-2.5
1,041	-				-0.5
1,047	-				-0.1
1,047	-				-2.8
1,047	-				-1.0
1,054	+				+3.9
1,056	-				+1.2
1,062	+				+2.3
1,068	-				+2.0
1,070	-				+1.3
1,070	-				-0.8
1,070	-				-0.7
1,072	-				-1.7
1,087	+				+0.7
1,106	+				-0.0
1,107	-				-1.3
1,107	-				+1.1
1,110	-				-1.7
1,114	+				-0.5
1,115	-				+1.5
1,116	+				+2.3
1,121	+				-2.3
1,127	+				+4.6
1,129	+				+0.3
1,129	+				-2.0
1,135	-				-1.3
1,140	+				+3.6
1,140	+				+0.5
1,146	+				+0.5
1,153	+				-2.0
1,153	-				+2.5
1,155	+				+1.3
1,155	+				-0.9
1,163	-				+0.3
1,163	-				-1.3
1,163	-				-0.8
1,163	-				-0.7
1,166	-				-0.9
1,185	+				+0.7
1,188	-				-1.2
1,190	+				+1.3
1,193	-				-2.7
1,193	-				+0.7
1,200	+				+0.6
1,208	-				+0.7
1,238	+				-0.1
1,254	+				+0.8
1,254	+				-3.3
1,256	+				+0.1
1,256	+				+0.7
1,256	+				-0.9
1,256	+				-1.3
1,256	+				+0.3
1,256	+				+3.1
1,256	+				-1.2
1,256	+				-0.5
1,256	+				+4.6
1,256	+				-1.2
1,256	+				-0.2
1,256	+				+3.0
1,256	+				-0.7
1,256	+				-1.0
1,256	+				+2.4
1,256	+				+1.3
1,256	+				+2.3
1,256	+				+1.3
1,256	+				-0.3
1,256	-				-1.0
1,257	-				+1.0
1,262	-				-2.9
1,262	-				+0.7
1,264	-				+1.0
1,264	-				+1.1
1,264	-				-1.3
1,264	-				+0.8
1,264	-				-1.5
1,264	-				+1.4
1,264	-				+0.3
1,264	-				+1.3
1,264	-				+0.3
1,264	-				+2.7
1,264	-				+0.3
1,278	-				-2.0
1,280	+				-3.3
1,282	+				-0.3
1,283	+				+2.3
1,285	+				-1.0
1,285	+				+0.7
1,285	+				+0.7
1,285	+				-0.7
1,285	+				+1.0
1,288	-				-1.1
1,291	-				-0.0
1,293	-				+0.3
1,293	-				-0.3
1,293	-				-0.9
1,293	-				+1.4
1,293	-				-1.6
1,298	-				+5.1
1,298	-				-3.4
1,317	+				+1.4
1,333	+				+0.2
1,341	-				+0.4
1,356	-				+1.1
1,384	+				+0.2
1,389	+				-1.2
1,394	+				-0.0
1,394	+				-0.4
1,394	+				-1.3
1,397	-				+1.5
1,397	-				+2.2
1,402	+				+0.1
1,402	+				-1.3
1,412	+				-0.0
1,412	-				+6.2
1,417	+				-1.0
1,425	-				+1.8
1,435	-				+2.3
1,451	+				+1.3
1,459	-				-3.7
1,459	-				+2.7
1,481	+				-2.3
1,489	-				+0.5
1,489	-				+2.3
1,489	-				+2.0
1,494	+				-2.8
1,495	-				-2.0
1,495	-				+0.9
1,495	-				-0.0
1,517	+				+1.2
1,517	+				+2.3
1,519	-				-2.2
1,525	-				-3.0
1,527	+				+1.5
1,527	+				-2.4
1,527	+				+0.4
1,527	+				-0.7
1,527	+				-1.2
1,527	+				-1.5
1,527	+				-0.2
1,527	+				+0.5
1,530	-				-2.1
1,532	+				-2.5
1,532	+				-1.4
1,535	-				-2.8
1,535	-				-3.5
1,535	-				+1.4
1,535	-				+2.3
1,535	-				-3.3
1,535	-				-0.0
1,535	-				-3.1
1,535	-				+1.3
1,535	-				+0.4
1,535	-				-1.8
1,540	-				+3.9
1,540	-				+0.9
1,549	+				-1.8
1,557	+				+0.7
1,557	+				+0.8
1,565	-				+1.0
1,566	-				-1.9
1,587	-				+2.3
1,625	-				+0.3
1,627	+				-1.3
1,635	-				-1.0
1,637	+				-1.0
1,639	+				-1.8
1,650	+				-1.5
1,650	+				+0.8
1,650	+				+1.6
1,650	+				-2.7
1,650	+				-0.0
1,650	+				+0.5
1,650	+				+1.3
1,650	+				-1.8
1,650	+				+0.6
1,650	+				+1.1
1,650	+				+1.0
1,650	+				-0.7
1,653	-				+0.5
1,655	+				+0.1
1,655	-				-1.9
1,655	-				-0.5
1,658	-				+0.7
1,658	-				-1.9
1,658	-				-0.7
1,658	-				+2.8
1,658	-				-0.0
1,671	+				-0.4
1,671	+				-1.0
1,671	+				-0.0
1,671	+				+3.4
1,671	+				-1.6
1,672	+				-0.9
1,679	-				-2.7
1,679	-				+0.2
1,679	-				-2.3
1,680	-				-1.5
1,700	-				+4.4
1,702	-				-1.0
1,705	-				+0.1
1,705	-				-2.0
1,711	+				+0.4
1,714	-				+0.5
1,714	-				+0.3