Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3990 and Dshi_3991 are separated by 561 nucleotides Dshi_3991 and Dshi_3992 are separated by 1 nucleotides Dshi_3992 and Dshi_3993 are separated by 26 nucleotides
Dshi_3990: Dshi_3990 - hypothetical protein (RefSeq), at 52,923 to 53,516
_3990
Dshi_3991: Dshi_3991 - hypothetical protein (RefSeq), at 54,078 to 54,284
_3991
Dshi_3992: Dshi_3992 - no description, at 54,286 to 54,797
_3992
Dshi_3993: Dshi_3993 - hypothetical protein (RefSeq), at 54,824 to 55,849
_3993
Position (kb) 54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 53.100 kb on + strand, within Dshi_3990 at 53.101 kb on - strand, within Dshi_3990 at 53.117 kb on - strand, within Dshi_3990 at 53.205 kb on - strand, within Dshi_3990 at 53.365 kb on + strand, within Dshi_3990 at 53.454 kb on + strand, within Dshi_3990 at 53.462 kb on - strand at 53.502 kb on - strand at 53.519 kb on - strand at 53.698 kb on + strand at 53.715 kb on + strand at 53.715 kb on + strand at 53.723 kb on - strand at 53.723 kb on - strand at 53.806 kb on + strand at 53.806 kb on + strand at 53.813 kb on - strand at 54.012 kb on - strand at 54.309 kb on + strand at 54.460 kb on + strand, within Dshi_3992 at 54.469 kb on + strand, within Dshi_3992 at 54.474 kb on + strand, within Dshi_3992 at 54.516 kb on - strand, within Dshi_3992 at 54.664 kb on + strand, within Dshi_3992 at 54.676 kb on - strand, within Dshi_3992 at 54.720 kb on - strand, within Dshi_3992 at 54.720 kb on - strand, within Dshi_3992 at 54.740 kb on + strand, within Dshi_3992 at 54.750 kb on + strand at 54.755 kb on + strand at 54.855 kb on - strand at 54.889 kb on + strand at 54.919 kb on + strand at 55.020 kb on + strand, within Dshi_3993 at 55.119 kb on + strand, within Dshi_3993 at 55.161 kb on + strand, within Dshi_3993 at 55.162 kb on - strand, within Dshi_3993 at 55.245 kb on + strand, within Dshi_3993 at 55.276 kb on - strand, within Dshi_3993
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 53,100 + Dshi_3990 0.30 -0.0 53,101 - Dshi_3990 0.30 -0.7 53,117 - Dshi_3990 0.33 -2.0 53,205 - Dshi_3990 0.47 +0.0 53,365 + Dshi_3990 0.74 +0.0 53,454 + Dshi_3990 0.89 -0.8 53,462 - -2.0 53,502 - +0.8 53,519 - -1.4 53,698 + +2.4 53,715 + -1.3 53,715 + -0.1 53,723 - +0.7 53,723 - +0.9 53,806 + +1.3 53,806 + +0.0 53,813 - +1.2 54,012 - +0.4 54,309 + +3.0 54,460 + Dshi_3992 0.34 +0.5 54,469 + Dshi_3992 0.36 +1.6 54,474 + Dshi_3992 0.37 -0.0 54,516 - Dshi_3992 0.45 -1.5 54,664 + Dshi_3992 0.74 +1.7 54,676 - Dshi_3992 0.76 +0.6 54,720 - Dshi_3992 0.85 +0.2 54,720 - Dshi_3992 0.85 -0.6 54,740 + Dshi_3992 0.89 -1.7 54,750 + -1.7 54,755 + +1.2 54,855 - +0.8 54,889 + +0.2 54,919 + -3.2 55,020 + Dshi_3993 0.19 -2.3 55,119 + Dshi_3993 0.29 +2.3 55,161 + Dshi_3993 0.33 -3.0 55,162 - Dshi_3993 0.33 +0.2 55,245 + Dshi_3993 0.41 -0.1 55,276 - Dshi_3993 0.44 +1.0
Or see this region's nucleotide sequence