Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3352

Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.0001 mg/ml
3,521,484	-		Dshi_3351	0.78	+1.1
3,521,522	-		Dshi_3351	0.81	-0.9
3,521,558	+		Dshi_3351	0.83	-1.8
3,521,600	-		Dshi_3351	0.86	+0.4
3,521,633	+		Dshi_3351	0.88	-1.3
3,521,715	-				-0.5
3,521,778	+				-0.7
3,521,815	+				-2.1
3,521,884	+				+1.1
3,521,924	+				+0.2
3,521,930	+				+2.6
3,521,944	+				+0.4
3,521,952	-				+1.4
3,521,964	-				-2.4
3,522,025	+				+2.6
3,522,049	-				-2.9
3,522,056	+				+3.4
3,522,056	+				+0.6
3,522,064	-				+0.5
3,522,183	+				-0.2
3,522,183	+				-0.9
3,522,191	-				+0.1
3,522,200	+				+2.1
3,522,234	+				+1.1
3,522,275	+				-1.3
3,522,288	-				+0.1
3,522,367	-				-1.8
3,522,373	+				+1.1
3,522,451	-				+0.9
3,522,516	-		Dshi_3352	0.14	-0.7
3,522,554	+		Dshi_3352	0.17	+0.8
3,522,595	+		Dshi_3352	0.21	-0.5
3,522,601	+		Dshi_3352	0.22	-0.3
3,522,651	+		Dshi_3352	0.26	+1.9
3,522,693	-		Dshi_3352	0.30	-0.7
3,522,702	+		Dshi_3352	0.31	+0.9
3,522,710	-		Dshi_3352	0.32	+0.7
3,522,710	-		Dshi_3352	0.32	+1.1
3,522,716	-		Dshi_3352	0.32	+0.6
3,522,718	+		Dshi_3352	0.33	+0.1
3,522,726	-		Dshi_3352	0.33	-0.5
3,522,726	-		Dshi_3352	0.33	+0.1
3,522,726	-		Dshi_3352	0.33	+2.1
3,522,736	+		Dshi_3352	0.34	+0.2
3,522,737	+		Dshi_3352	0.34	-0.5
3,522,787	-		Dshi_3352	0.39	-2.7
3,522,816	+		Dshi_3352	0.42	+1.1
3,522,838	-		Dshi_3352	0.44	+0.7
3,522,938	-		Dshi_3352	0.53	+0.1
3,522,943	+		Dshi_3352	0.54	-2.3
3,522,962	+		Dshi_3352	0.56	+0.5
3,522,970	-		Dshi_3352	0.56	-2.8
3,522,972	-		Dshi_3352	0.57	-0.6
3,523,101	+		Dshi_3352	0.69	-0.9
3,523,110	+		Dshi_3352	0.69	-0.5
3,523,115	+		Dshi_3352	0.70	+1.5
3,523,115	+		Dshi_3352	0.70	+1.3
3,523,115	+		Dshi_3352	0.70	+2.6
3,523,120	+		Dshi_3352	0.70	+0.6
3,523,120	+		Dshi_3352	0.70	-0.1
3,523,125	+		Dshi_3352	0.71	+0.2
3,523,133	-		Dshi_3352	0.72	-0.1
3,523,133	-				+1.1
3,523,154	-		Dshi_3352	0.74	+1.6
3,523,195	+		Dshi_3352	0.77	+1.2
3,523,198	-		Dshi_3352	0.78	+0.1
3,523,275	+		Dshi_3352	0.85	+1.1
3,523,294	-		Dshi_3352	0.87	+0.1
3,523,322	+		Dshi_3352	0.89	+0.8
3,523,330	-				-0.8
3,523,332	+				-0.4
3,523,332	+				-1.8
3,523,341	+				+4.1
3,523,412	+				+2.1
3,523,412	+				+0.5
3,523,453	+				-0.9
3,523,461	-				-0.9
3,523,461	-				+0.1
3,523,461	-				-0.5
3,523,493	+				+2.4
3,523,548	+				+1.4
3,523,609	-				-2.9
3,523,629	+				+1.2
3,523,643	-				-2.1
3,523,716	-		Dshi_3353	0.12	-0.6
3,523,768	+		Dshi_3353	0.14	-0.6
3,523,769	-		Dshi_3353	0.14	+1.8
3,523,773	-		Dshi_3353	0.15	+1.2
3,523,844	+		Dshi_3353	0.17	+0.1
3,523,852	+		Dshi_3353	0.18	+3.4
3,523,862	-		Dshi_3353	0.18	+1.6
3,523,875	-		Dshi_3353	0.19	+1.1
3,523,948	+		Dshi_3353	0.22	+1.1
3,523,962	-		Dshi_3353	0.22	+0.1
3,524,018	-		Dshi_3353	0.25	+0.1
3,524,055	+		Dshi_3353	0.26	-2.3
3,524,128	-		Dshi_3353	0.29	-0.4
3,524,185	-		Dshi_3353	0.32	+0.2
3,524,196	+		Dshi_3353	0.32	-2.1
3,524,203	+		Dshi_3353	0.32	+0.9
3,524,209	-		Dshi_3353	0.33	+2.1
3,524,216	-		Dshi_3353	0.33	+0.6
3,524,228	-		Dshi_3353	0.33	+1.1
3,524,270	-		Dshi_3353	0.35	+0.7
3,524,424	-		Dshi_3353	0.42	+0.1
3,524,424	-		Dshi_3353	0.42	+3.1