Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3315
Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,477,913 | + | +0.6 | |||
3,477,922 | - | +0.6 | |||
3,478,019 | - | -1.6 | |||
3,478,020 | - | -0.2 | |||
3,478,067 | - | -0.4 | |||
3,478,156 | - | -1.1 | |||
3,478,156 | - | -0.3 | |||
3,478,193 | + | -0.6 | |||
3,478,302 | - | +0.7 | |||
3,478,390 | + | Dshi_3315 | 0.38 | -0.3 | |
3,478,405 | + | Dshi_3315 | 0.43 | +0.0 | |
3,478,411 | + | Dshi_3315 | 0.45 | +0.2 | |
3,478,421 | + | Dshi_3315 | 0.48 | +0.0 | |
3,478,530 | - | Dshi_3315 | 0.83 | -0.5 | |
3,478,530 | - | Dshi_3315 | 0.83 | -1.5 | |
3,478,551 | - | Dshi_3315 | 0.89 | -1.8 | |
3,479,558 | + | +0.5 |
Or see this region's nucleotide sequence