Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2962 and Dshi_2963 are separated by 22 nucleotides Dshi_2963 and Dshi_2964 are separated by 92 nucleotides
Dshi_2962: Dshi_2962 - inner-membrane translocator (RefSeq), at 3,128,219 to 3,129,304
_2962
Dshi_2963: Dshi_2963 - inner-membrane translocator (RefSeq), at 3,129,327 to 3,130,253
_2963
Dshi_2964: Dshi_2964 - basic membrane lipoprotein (RefSeq), at 3,130,346 to 3,131,509
_2964
Position (kb)
3129
3130
3131 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3128.419 kb on + strand, within Dshi_2962 at 3128.427 kb on - strand, within Dshi_2962 at 3128.504 kb on - strand, within Dshi_2962 at 3128.614 kb on + strand, within Dshi_2962 at 3128.636 kb on + strand, within Dshi_2962 at 3128.694 kb on - strand, within Dshi_2962 at 3128.728 kb on - strand, within Dshi_2962 at 3128.739 kb on + strand, within Dshi_2962 at 3128.747 kb on - strand, within Dshi_2962 at 3128.747 kb on - strand, within Dshi_2962 at 3128.747 kb on - strand, within Dshi_2962 at 3128.772 kb on + strand, within Dshi_2962 at 3128.780 kb on - strand, within Dshi_2962 at 3128.799 kb on + strand, within Dshi_2962 at 3128.799 kb on + strand, within Dshi_2962 at 3128.807 kb on - strand, within Dshi_2962 at 3128.807 kb on - strand, within Dshi_2962 at 3128.813 kb on + strand, within Dshi_2962 at 3128.822 kb on + strand, within Dshi_2962 at 3128.891 kb on + strand, within Dshi_2962 at 3129.068 kb on + strand, within Dshi_2962 at 3129.366 kb on + strand at 3129.567 kb on + strand at 3129.697 kb on + strand, within Dshi_2963 at 3129.713 kb on + strand, within Dshi_2963 at 3129.767 kb on - strand, within Dshi_2963 at 3129.788 kb on + strand, within Dshi_2963 at 3129.793 kb on + strand, within Dshi_2963 at 3129.801 kb on - strand, within Dshi_2963 at 3129.819 kb on + strand, within Dshi_2963 at 3129.827 kb on - strand, within Dshi_2963 at 3129.828 kb on - strand, within Dshi_2963 at 3129.879 kb on - strand, within Dshi_2963 at 3129.929 kb on + strand, within Dshi_2963 at 3129.977 kb on + strand, within Dshi_2963 at 3129.985 kb on - strand, within Dshi_2963 at 3130.057 kb on + strand, within Dshi_2963 at 3130.060 kb on + strand, within Dshi_2963 at 3130.152 kb on - strand, within Dshi_2963 at 3130.247 kb on + strand at 3130.359 kb on - strand at 3130.408 kb on - strand at 3130.495 kb on + strand, within Dshi_2964 at 3130.583 kb on + strand, within Dshi_2964 at 3130.664 kb on + strand, within Dshi_2964 at 3130.738 kb on + strand, within Dshi_2964 at 3130.813 kb on + strand, within Dshi_2964 at 3130.969 kb on - strand, within Dshi_2964
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 3,128,419 + Dshi_2962 0.18 +3.3 3,128,427 - Dshi_2962 0.19 -2.3 3,128,504 - Dshi_2962 0.26 +1.0 3,128,614 + Dshi_2962 0.36 +1.1 3,128,636 + Dshi_2962 0.38 +0.4 3,128,694 - Dshi_2962 0.44 -2.1 3,128,728 - Dshi_2962 0.47 -1.6 3,128,739 + Dshi_2962 0.48 -1.3 3,128,747 - Dshi_2962 0.49 +1.3 3,128,747 - Dshi_2962 0.49 +3.6 3,128,747 - Dshi_2962 0.49 +2.0 3,128,772 + Dshi_2962 0.51 +1.5 3,128,780 - Dshi_2962 0.52 +0.2 3,128,799 + Dshi_2962 0.53 +2.0 3,128,799 + Dshi_2962 0.53 +0.8 3,128,807 - Dshi_2962 0.54 +0.8 3,128,807 - Dshi_2962 0.54 -1.8 3,128,813 + Dshi_2962 0.55 -0.7 3,128,822 + Dshi_2962 0.56 +0.8 3,128,891 + Dshi_2962 0.62 -0.0 3,129,068 + Dshi_2962 0.78 +3.3 3,129,366 + +0.8 3,129,567 + +1.0 3,129,697 + Dshi_2963 0.40 +1.0 3,129,713 + Dshi_2963 0.42 -0.5 3,129,767 - Dshi_2963 0.47 -1.3 3,129,788 + Dshi_2963 0.50 +1.6 3,129,793 + Dshi_2963 0.50 -0.6 3,129,801 - Dshi_2963 0.51 -0.0 3,129,819 + Dshi_2963 0.53 +3.3 3,129,827 - Dshi_2963 0.54 +0.1 3,129,828 - Dshi_2963 0.54 +3.3 3,129,879 - Dshi_2963 0.60 -0.3 3,129,929 + Dshi_2963 0.65 +0.3 3,129,977 + Dshi_2963 0.70 -2.5 3,129,985 - Dshi_2963 0.71 -0.0 3,130,057 + Dshi_2963 0.79 +1.0 3,130,060 + Dshi_2963 0.79 -0.0 3,130,152 - Dshi_2963 0.89 -0.2 3,130,247 + -0.7 3,130,359 - -1.2 3,130,408 - +1.0 3,130,495 + Dshi_2964 0.13 -1.0 3,130,583 + Dshi_2964 0.20 +1.7 3,130,664 + Dshi_2964 0.27 -2.5 3,130,738 + Dshi_2964 0.34 +0.7 3,130,813 + Dshi_2964 0.40 +1.1 3,130,969 - Dshi_2964 0.54 +1.1
Or see this region's nucleotide sequence