Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2957
Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,117,532 | + | -1.1 | |||
3,117,542 | - | -3.5 | |||
3,117,542 | - | +0.5 | |||
3,117,791 | - | +0.9 | |||
3,117,824 | - | -0.2 | |||
3,121,553 | - | -2.9 | |||
3,121,582 | - | -2.7 | |||
3,121,655 | - | +0.7 | |||
3,121,656 | + | +2.0 | |||
3,121,673 | + | +1.2 | |||
3,121,681 | - | -2.3 | |||
3,121,813 | - | +0.9 | |||
3,121,815 | + | +4.8 | |||
3,121,947 | - | Dshi_2958 | 0.16 | -2.3 | |
3,122,164 | - | Dshi_2958 | 0.31 | -0.9 | |
3,122,184 | + | Dshi_2958 | 0.33 | +0.6 | |
3,122,303 | + | Dshi_2958 | 0.41 | +0.7 | |
3,122,343 | + | Dshi_2958 | 0.43 | +1.0 | |
3,122,404 | + | Dshi_2958 | 0.48 | +0.1 |
Or see this region's nucleotide sequence