Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2795 and Dshi_2796 are separated by 6 nucleotides Dshi_2796 and Dshi_2797 are separated by 125 nucleotides Dshi_2797 and Dshi_2798 overlap by 4 nucleotides Dshi_2798 and Dshi_2799 are separated by 120 nucleotides
Dshi_2795: Dshi_2795 - hypothetical protein (RefSeq), at 2,954,277 to 2,955,392
_2795
Dshi_2796: Dshi_2796 - heat shock protein Hsp20 (RefSeq), at 2,955,399 to 2,955,857
_2796
Dshi_2797: Dshi_2797 - Fructokinase (EC 2.7.1.4) (from data) , at 2,955,983 to 2,956,909
_2797
Dshi_2798: Dshi_2798 - D-tyrosyl-tRNA(Tyr) deacylase (RefSeq), at 2,956,906 to 2,957,343
_2798
Dshi_2799: Dshi_2799 - Flavocytochrome c sulphide dehydrogenase flavin-binding (RefSeq), at 2,957,464 to 2,958,732
_2799
Position (kb)
2955
2956
2957 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2955.033 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.056 kb on + strand, within Dshi_2795 at 2955.072 kb on - strand, within Dshi_2795 at 2955.196 kb on + strand, within Dshi_2795 at 2955.361 kb on + strand at 2955.624 kb on + strand, within Dshi_2796 at 2955.633 kb on + strand, within Dshi_2796 at 2955.677 kb on + strand, within Dshi_2796 at 2955.690 kb on + strand, within Dshi_2796 at 2955.705 kb on - strand, within Dshi_2796 at 2955.777 kb on - strand, within Dshi_2796 at 2955.792 kb on - strand, within Dshi_2796 at 2955.836 kb on - strand at 2955.972 kb on - strand at 2956.091 kb on - strand, within Dshi_2797 at 2956.115 kb on + strand, within Dshi_2797 at 2956.187 kb on + strand, within Dshi_2797 at 2956.350 kb on - strand, within Dshi_2797 at 2956.555 kb on - strand, within Dshi_2797 at 2956.555 kb on - strand, within Dshi_2797 at 2956.573 kb on - strand, within Dshi_2797 at 2956.616 kb on + strand, within Dshi_2797 at 2956.725 kb on - strand, within Dshi_2797 at 2956.823 kb on + strand at 2956.834 kb on - strand at 2956.856 kb on + strand at 2956.976 kb on + strand, within Dshi_2798 at 2956.984 kb on - strand, within Dshi_2798 at 2957.304 kb on + strand at 2957.530 kb on - strand at 2957.613 kb on + strand, within Dshi_2799 at 2957.621 kb on - strand, within Dshi_2799 at 2957.640 kb on - strand, within Dshi_2799 at 2957.717 kb on + strand, within Dshi_2799
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 2,955,033 - Dshi_2795 0.68 +0.6 2,955,052 - Dshi_2795 0.69 -0.9 2,955,052 - Dshi_2795 0.69 +0.9 2,955,056 + Dshi_2795 0.70 +1.3 2,955,072 - Dshi_2795 0.71 -0.5 2,955,196 + Dshi_2795 0.82 +2.9 2,955,361 + +0.9 2,955,624 + Dshi_2796 0.49 -1.9 2,955,633 + Dshi_2796 0.51 +0.9 2,955,677 + Dshi_2796 0.61 -3.1 2,955,690 + Dshi_2796 0.63 -3.4 2,955,705 - Dshi_2796 0.67 +3.8 2,955,777 - Dshi_2796 0.82 -1.6 2,955,792 - Dshi_2796 0.86 -0.1 2,955,836 - -0.1 2,955,972 - +0.3 2,956,091 - Dshi_2797 0.12 -0.5 2,956,115 + Dshi_2797 0.14 -1.6 2,956,187 + Dshi_2797 0.22 +0.8 2,956,350 - Dshi_2797 0.40 +2.9 2,956,555 - Dshi_2797 0.62 -0.6 2,956,555 - Dshi_2797 0.62 -1.5 2,956,573 - Dshi_2797 0.64 -1.3 2,956,616 + Dshi_2797 0.68 +0.9 2,956,725 - Dshi_2797 0.80 +1.4 2,956,823 + +0.9 2,956,834 - +0.4 2,956,856 + -0.7 2,956,976 + Dshi_2798 0.16 +1.3 2,956,984 - Dshi_2798 0.18 +4.1 2,957,304 + -1.9 2,957,530 - -0.6 2,957,613 + Dshi_2799 0.12 -2.6 2,957,621 - Dshi_2799 0.12 +0.9 2,957,640 - Dshi_2799 0.14 -0.8 2,957,717 + Dshi_2799 0.20 +0.9
Or see this region's nucleotide sequence