Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2769
Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,930,437 | + | Dshi_2768 | 0.17 | -1.9 | |
2,930,687 | - | Dshi_2768 | 0.47 | +0.9 | |
2,930,696 | - | Dshi_2768 | 0.48 | -2.7 | |
2,930,792 | - | Dshi_2768 | 0.60 | -0.7 | |
2,930,824 | - | Dshi_2768 | 0.64 | -0.1 | |
2,930,831 | + | Dshi_2768 | 0.65 | +0.9 | |
2,931,117 | + | -0.1 | |||
2,931,120 | - | +0.9 | |||
2,931,125 | - | -1.1 | |||
2,931,137 | - | -1.1 | |||
2,931,143 | - | -2.3 | |||
2,931,143 | - | -1.8 | |||
2,931,143 | - | -0.7 | |||
2,931,164 | - | -0.9 | |||
2,931,174 | + | -2.1 | |||
2,931,193 | - | +2.5 | |||
2,931,262 | + | Dshi_2769 | 0.16 | +0.9 | |
2,931,270 | + | Dshi_2769 | 0.17 | -1.9 | |
2,931,275 | + | Dshi_2769 | 0.18 | +0.9 | |
2,931,280 | + | Dshi_2769 | 0.19 | +2.5 | |
2,931,311 | - | Dshi_2769 | 0.24 | +3.5 | |
2,931,384 | + | Dshi_2769 | 0.36 | +2.0 | |
2,931,704 | - | +1.7 | |||
2,931,742 | + | -3.2 | |||
2,932,732 | + | Dshi_2770 | 0.70 | -0.5 |
Or see this region's nucleotide sequence