Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2683
Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,842,847 | + | Dshi_2682 | 0.28 | +1.9 | |
2,843,075 | + | Dshi_2682 | 0.49 | +0.2 | |
2,843,359 | - | Dshi_2682 | 0.75 | -0.1 | |
2,843,533 | - | +1.3 | |||
2,843,799 | + | +0.9 | |||
2,843,922 | - | +0.9 | |||
2,843,942 | - | Dshi_2683 | 0.12 | +0.9 | |
2,844,020 | + | Dshi_2683 | 0.20 | +0.3 | |
2,844,195 | - | Dshi_2683 | 0.37 | -0.6 | |
2,844,196 | - | Dshi_2683 | 0.37 | +2.1 | |
2,844,280 | + | Dshi_2683 | 0.45 | +0.9 | |
2,844,280 | + | Dshi_2683 | 0.45 | +0.4 | |
2,844,285 | + | Dshi_2683 | 0.46 | -2.1 | |
2,844,300 | - | Dshi_2683 | 0.47 | -2.6 | |
2,844,407 | + | Dshi_2683 | 0.58 | +3.1 | |
2,844,407 | + | Dshi_2683 | 0.58 | +0.9 | |
2,844,430 | - | Dshi_2683 | 0.60 | -1.2 | |
2,844,556 | + | Dshi_2683 | 0.73 | +1.2 | |
2,844,786 | - | -0.9 | |||
2,844,882 | + | +0.9 | |||
2,844,901 | + | +0.8 | |||
2,845,262 | - | +0.9 | |||
2,845,339 | - | +2.5 | |||
2,845,555 | - | -0.7 | |||
2,845,586 | - | +0.9 | |||
2,845,666 | - | +1.3 | |||
2,845,808 | - | Dshi_2685 | 0.14 | -2.3 | |
2,845,818 | - | Dshi_2685 | 0.15 | +2.5 | |
2,845,827 | - | Dshi_2685 | 0.16 | -1.7 |
Or see this region's nucleotide sequence