Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2163

Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.0001 mg/ml
2,291,410	+				-0.8
2,291,456	-				-0.7
2,291,483	+				-0.1
2,291,547	-				-4.4
2,291,547	-				+0.8
2,291,635	+				-0.3
2,291,638	-				-0.5
2,291,643	-				+1.8
2,291,665	+				+2.0
2,291,665	+				+1.1
2,291,673	-				-1.8
2,291,673	-				-4.1
2,291,689	+				-3.2
2,291,773	-		Dshi_2162	0.12	-0.9
2,291,887	-		Dshi_2162	0.28	-2.5
2,291,897	-		Dshi_2162	0.30	+0.9
2,291,919	+		Dshi_2162	0.33	-0.0
2,291,942	-		Dshi_2162	0.36	-1.5
2,291,948	+		Dshi_2162	0.37	-1.3
2,291,971	-		Dshi_2162	0.40	-0.8
2,291,971	-		Dshi_2162	0.40	+0.2
2,291,980	+		Dshi_2162	0.42	-1.6
2,291,988	-		Dshi_2162	0.43	+1.3
2,291,988	-		Dshi_2162	0.43	-1.5
2,291,990	-		Dshi_2162	0.43	+1.8
2,291,998	-		Dshi_2162	0.44	-4.5
2,292,059	-		Dshi_2162	0.53	+0.3
2,292,224	+		Dshi_2162	0.76	-0.7
2,292,232	-		Dshi_2162	0.77	+0.5
2,292,263	+		Dshi_2162	0.81	+0.4
2,292,456	-				+0.5
2,292,491	-				+0.8
2,292,498	+				-1.1
2,292,498	-				+1.8
2,292,521	-				-0.5
2,292,531	-				-3.9
2,292,550	-				+1.6
2,292,570	+				-1.6
2,292,743	+				-1.7
2,292,767	-				+1.5
2,292,772	+				+2.3
2,292,791	-		Dshi_2163	0.10	-1.4
2,292,890	+		Dshi_2163	0.13	-0.6
2,292,897	-		Dshi_2163	0.13	-2.6
2,292,963	-		Dshi_2163	0.15	+0.2
2,293,028	+		Dshi_2163	0.16	-1.7
2,293,159	-		Dshi_2163	0.20	-1.6
2,293,211	-		Dshi_2163	0.21	-0.7
2,293,221	-		Dshi_2163	0.21	-0.2
2,293,221	-		Dshi_2163	0.21	-2.0
2,293,227	+		Dshi_2163	0.21	-0.3
2,293,227	+		Dshi_2163	0.21	-0.4
2,293,294	+		Dshi_2163	0.23	-0.4
2,293,354	+		Dshi_2163	0.25	-1.2
2,293,407	+		Dshi_2163	0.26	-0.8
2,293,413	-		Dshi_2163	0.26	-1.4
2,293,448	-		Dshi_2163	0.27	+2.1
2,293,467	-		Dshi_2163	0.28	-2.4
2,293,477	-		Dshi_2163	0.28	+0.1
2,293,581	+		Dshi_2163	0.31	-0.3
2,293,606	-		Dshi_2163	0.31	+1.3
2,293,653	-		Dshi_2163	0.32	-2.2
2,293,682	+		Dshi_2163	0.33	-0.7
2,293,682	+		Dshi_2163	0.33	-0.5
2,293,769	-		Dshi_2163	0.35	-2.2
2,293,775	+		Dshi_2163	0.35	-2.4
2,293,937	+		Dshi_2163	0.40	+1.5
2,293,945	-		Dshi_2163	0.40	+1.8
2,294,012	-		Dshi_2163	0.42	+0.0
2,294,118	+		Dshi_2163	0.44	+1.6
2,294,152	+		Dshi_2163	0.45	-1.1
2,294,205	-		Dshi_2163	0.46	-2.9
2,294,231	-		Dshi_2163	0.47	+0.0
2,294,245	-		Dshi_2163	0.47	+1.2
2,294,388	+		Dshi_2163	0.51	-0.6
2,294,412	+		Dshi_2163	0.52	-0.0
2,294,480	-		Dshi_2163	0.53	-3.4
2,294,504	+		Dshi_2163	0.54	+0.9
2,294,541	+		Dshi_2163	0.55	-1.8
2,294,560	-		Dshi_2163	0.55	-1.5
2,294,611	+		Dshi_2163	0.57	-2.3
2,294,718	-		Dshi_2163	0.60	-1.4
2,294,718	-		Dshi_2163	0.60	+1.3
2,294,723	-		Dshi_2163	0.60	+0.8
2,294,741	+		Dshi_2163	0.60	-2.9
2,294,785	+		Dshi_2163	0.61	+1.6
2,294,792	-		Dshi_2163	0.61	+0.2
2,294,924	+		Dshi_2163	0.65	-1.6
2,294,930	+		Dshi_2163	0.65	-3.7
2,294,933	-		Dshi_2163	0.65	+3.9
2,294,943	-		Dshi_2163	0.65	-1.7
2,294,945	+		Dshi_2163	0.65	-4.2
2,294,945	-		Dshi_2163	0.65	-1.2
2,294,947	+		Dshi_2163	0.65	+0.5
2,294,947	+		Dshi_2163	0.65	-1.2
2,294,952	+		Dshi_2163	0.65	-2.4
2,294,965	-		Dshi_2163	0.66	+0.4
2,294,977	+		Dshi_2163	0.66	+1.6
2,294,986	-		Dshi_2163	0.66	+1.0
2,295,004	+		Dshi_2163	0.67	-1.5
2,295,037	+		Dshi_2163	0.68	-2.7
2,295,043	-		Dshi_2163	0.68	+1.5
2,295,096	-		Dshi_2163	0.69	+2.1
2,295,101	+		Dshi_2163	0.69	-0.1
2,295,109	-		Dshi_2163	0.69	+2.1
2,295,109	-		Dshi_2163	0.69	+0.8
2,295,109	-		Dshi_2163	0.69	-0.5
2,295,109	-		Dshi_2163	0.69	-1.6
2,295,166	-		Dshi_2163	0.71	+0.8
2,295,171	+		Dshi_2163	0.71	-0.2
2,295,171	+		Dshi_2163	0.71	-0.5
2,295,177	+		Dshi_2163	0.71	+3.8
2,295,222	-		Dshi_2163	0.72	+1.8
2,295,244	-		Dshi_2163	0.73	-0.5
2,295,292	-		Dshi_2163	0.74	+0.6
2,295,300	+		Dshi_2163	0.74	-0.2
2,295,300	-		Dshi_2163	0.74	-0.9
2,295,310	-		Dshi_2163	0.75	-0.7
2,295,403	-		Dshi_2163	0.77	-0.4
2,295,403	-		Dshi_2163	0.77	+0.8
2,295,405	+		Dshi_2163	0.77	+1.2
2,295,434	+		Dshi_2163	0.78	-0.0
2,295,437	-		Dshi_2163	0.78	+1.1
2,295,437	-		Dshi_2163	0.78	-1.8
2,295,439	+		Dshi_2163	0.78	+0.5
2,295,442	-		Dshi_2163	0.78	+0.8
2,295,442	-		Dshi_2163	0.78	-2.5
2,295,447	-		Dshi_2163	0.78	-0.5
2,295,450	+		Dshi_2163	0.78	-1.8
2,295,494	-		Dshi_2163	0.79	+1.1
2,295,542	-		Dshi_2163	0.81	-1.4
2,295,563	+		Dshi_2163	0.81	+0.1
2,295,563	+		Dshi_2163	0.81	-1.7
2,295,571	-		Dshi_2163	0.81	-0.2
2,295,574	+		Dshi_2163	0.81	+0.5
2,295,574	+		Dshi_2163	0.81	+0.8
2,295,582	-		Dshi_2163	0.82	-1.6
2,295,582	-		Dshi_2163	0.82	-0.0
2,295,587	+		Dshi_2163	0.82	+0.5
2,295,590	-		Dshi_2163	0.82	+0.2
2,295,683	-		Dshi_2163	0.84	-3.5
2,295,698	-		Dshi_2163	0.85	-0.8
2,295,742	+		Dshi_2163	0.86	+2.3
2,295,809	-		Dshi_2163	0.87	-1.0
2,295,824	-		Dshi_2163	0.88	-1.0
2,295,846	+		Dshi_2163	0.88	-0.1
2,295,870	-		Dshi_2163	0.89	+0.8
2,295,897	+		Dshi_2163	0.90	-1.3
2,295,905	-		Dshi_2163	0.90	-1.4
2,295,923	-				-2.0
2,296,025	-				+0.8
2,296,035	-				+2.0
2,296,049	-				-2.5
2,296,054	+				+0.5
2,296,234	+				+0.2
2,296,234	+				-0.0
2,296,356	+		Dshi_2164	0.11	+0.3
2,296,381	+		Dshi_2164	0.17	-1.8
2,296,382	+		Dshi_2164	0.17	-2.7
2,296,402	+		Dshi_2164	0.22	-2.8
2,296,407	+		Dshi_2164	0.23	-2.0
2,296,426	+		Dshi_2164	0.27	+2.1
2,296,433	-		Dshi_2164	0.29	-2.3
2,296,572	+		Dshi_2164	0.60	+1.1
2,296,621	-		Dshi_2164	0.71	-1.5
2,296,750	-				-2.1
2,296,750	-				-0.5
2,297,003	-		Dshi_2165	0.29	+1.6
2,297,131	-		Dshi_2165	0.43	+0.5
2,297,201	-		Dshi_2165	0.51	+0.2