Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2109

Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.0001 mg/ml
2,235,945	+				+0.8
2,235,945	+		Dshi_2108	0.69	-1.3
2,235,953	-		Dshi_2108	0.69	-1.8
2,235,966	+		Dshi_2108	0.70	-0.2
2,235,991	+		Dshi_2108	0.71	+1.2
2,236,005	-		Dshi_2108	0.71	+0.5
2,236,029	-		Dshi_2108	0.72	-1.7
2,236,128	+		Dshi_2108	0.76	+1.2
2,236,138	+		Dshi_2108	0.77	+1.8
2,236,166	+		Dshi_2108	0.78	-1.5
2,236,302	+		Dshi_2108	0.83	-1.2
2,236,346	+		Dshi_2108	0.85	-1.9
2,236,346	+		Dshi_2108	0.85	+1.6
2,236,375	-		Dshi_2108	0.86	-0.8
2,236,380	-		Dshi_2108	0.86	+1.8
2,236,468	-		Dshi_2108	0.90	+0.8
2,236,514	-				+0.8
2,236,725	+				+0.1
2,236,780	-				-0.8
2,236,829	+				-3.9
2,236,837	-				-0.3
2,236,837	-				+2.8
2,236,872	-				-0.2
2,236,876	+				+1.8
2,236,953	+				-0.4
2,237,117	+		Dshi_2109	0.20	+3.4
2,237,139	+		Dshi_2109	0.21	+1.8
2,237,147	-		Dshi_2109	0.22	-1.5
2,237,147	-		Dshi_2109	0.22	-0.9
2,237,152	-		Dshi_2109	0.23	-0.8
2,237,328	-		Dshi_2109	0.38	+0.1
2,237,368	-		Dshi_2109	0.41	+0.8
2,237,394	-		Dshi_2109	0.44	-1.8
2,237,399	-		Dshi_2109	0.44	-0.4
2,237,416	-		Dshi_2109	0.45	-0.9
2,237,477	+		Dshi_2109	0.51	+1.6
2,237,522	+		Dshi_2109	0.55	+0.7
2,237,579	-		Dshi_2109	0.60	+1.0
2,237,581	+		Dshi_2109	0.60	+2.6
2,237,682	+		Dshi_2109	0.69	-3.2
2,237,741	+		Dshi_2109	0.74	-0.2
2,237,769	-		Dshi_2109	0.76	+0.8
2,237,774	-		Dshi_2109	0.77	-0.8
2,237,796	-		Dshi_2109	0.78	+0.8
2,237,834	+		Dshi_2109	0.82	+0.5
2,237,951	-				+0.8
2,238,008	-				-1.8
2,238,019	+				+1.8
2,238,043	+				-2.9
2,238,043	+				-1.5
2,238,146	-				-1.1
2,238,168	-				-0.2
2,238,168	-				+2.8
2,238,209	-				+2.0
2,238,290	-		Dshi_2110	0.11	-0.8
2,238,316	+		Dshi_2110	0.14	-2.0
2,238,324	-		Dshi_2110	0.15	-1.0
2,238,441	-		Dshi_2110	0.28	-1.5
2,238,441	-		Dshi_2110	0.28	-2.4
2,238,472	-		Dshi_2110	0.31	-3.7
2,238,551	-		Dshi_2110	0.40	+0.1
2,238,551	-		Dshi_2110	0.40	-3.6
2,238,639	+		Dshi_2110	0.49	+2.4
2,238,643	+		Dshi_2110	0.50	+0.4
2,238,644	-		Dshi_2110	0.50	-2.8
2,238,693	-		Dshi_2110	0.55	-0.8
2,238,718	-		Dshi_2110	0.58	-0.1
2,238,899	+		Dshi_2110	0.78	+1.4