Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2073 and Dshi_2074 are separated by 336 nucleotides Dshi_2074 and Dshi_2075 are separated by 99 nucleotides Dshi_2075 and Dshi_2076 are separated by 189 nucleotides
Dshi_2073: Dshi_2073 - hypothetical protein (RefSeq), at 2,193,621 to 2,194,550
_2073
Dshi_2074: Dshi_2074 - adenine phosphoribosyltransferase (RefSeq), at 2,194,887 to 2,195,426
_2074
Dshi_2075: Dshi_2075 - protein of unknown function DUF302 (RefSeq), at 2,195,526 to 2,195,978
_2075
Dshi_2076: Dshi_2076 - FAD linked oxidase domain protein (RefSeq), at 2,196,168 to 2,197,586
_2076
Position (kb)
2195
2196 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2194.531 kb on - strand at 2194.571 kb on - strand at 2194.575 kb on + strand at 2194.581 kb on + strand at 2194.589 kb on - strand at 2194.601 kb on - strand at 2194.603 kb on - strand at 2194.640 kb on + strand at 2194.650 kb on + strand at 2194.668 kb on - strand at 2194.720 kb on - strand at 2194.733 kb on + strand at 2194.807 kb on - strand at 2194.814 kb on + strand at 2194.881 kb on - strand at 2194.934 kb on - strand at 2195.012 kb on - strand, within Dshi_2074 at 2195.082 kb on - strand, within Dshi_2074 at 2195.176 kb on - strand, within Dshi_2074 at 2195.314 kb on - strand, within Dshi_2074 at 2195.327 kb on - strand, within Dshi_2074 at 2195.380 kb on - strand at 2195.392 kb on - strand at 2195.407 kb on + strand at 2195.457 kb on + strand at 2195.535 kb on + strand at 2195.541 kb on - strand at 2195.631 kb on - strand, within Dshi_2075 at 2195.649 kb on + strand, within Dshi_2075 at 2195.649 kb on + strand, within Dshi_2075 at 2195.673 kb on + strand, within Dshi_2075 at 2195.714 kb on - strand, within Dshi_2075 at 2195.768 kb on - strand, within Dshi_2075 at 2195.778 kb on + strand, within Dshi_2075 at 2195.781 kb on - strand, within Dshi_2075 at 2196.010 kb on + strand at 2196.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 2,194,531 - +0.5 2,194,571 - -2.0 2,194,575 + +2.4 2,194,581 + -2.0 2,194,589 - +1.9 2,194,601 - +0.8 2,194,603 - +2.8 2,194,640 + +0.8 2,194,650 + +1.3 2,194,668 - -0.8 2,194,720 - -1.4 2,194,733 + -1.2 2,194,807 - -2.7 2,194,814 + -1.5 2,194,881 - +3.8 2,194,934 - -0.9 2,195,012 - Dshi_2074 0.23 -1.8 2,195,082 - Dshi_2074 0.36 +3.2 2,195,176 - Dshi_2074 0.54 +0.8 2,195,314 - Dshi_2074 0.79 +1.3 2,195,327 - Dshi_2074 0.81 +4.1 2,195,380 - -1.5 2,195,392 - -2.9 2,195,407 + +0.0 2,195,457 + -2.4 2,195,535 + +0.2 2,195,541 - +0.8 2,195,631 - Dshi_2075 0.23 +0.4 2,195,649 + Dshi_2075 0.27 -0.1 2,195,649 + Dshi_2075 0.27 +4.0 2,195,673 + Dshi_2075 0.32 +0.5 2,195,714 - Dshi_2075 0.42 -0.6 2,195,768 - Dshi_2075 0.53 -1.4 2,195,778 + Dshi_2075 0.56 +1.4 2,195,781 - Dshi_2075 0.56 +0.8 2,196,010 + +2.4 2,196,087 + +0.8
Or see this region's nucleotide sequence