Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2061
Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,180,468 | + | Dshi_2060 | 0.77 | -0.6 | |
2,180,594 | - | Dshi_2060 | 0.82 | -1.3 | |
2,180,706 | + | Dshi_2060 | 0.86 | -1.0 | |
2,180,731 | - | Dshi_2060 | 0.87 | -0.3 | |
2,180,813 | + | Dshi_2060 | 0.90 | -1.7 | |
2,180,821 | + | Dshi_2060 | 0.90 | +0.7 | |
2,180,841 | - | -2.8 | |||
2,180,868 | + | +0.5 | |||
2,180,876 | - | +0.3 | |||
2,180,878 | + | -0.1 | |||
2,180,886 | - | -2.4 | |||
2,181,099 | - | +3.1 | |||
2,181,147 | - | +0.0 | |||
2,181,158 | + | -1.8 | |||
2,181,178 | + | -0.3 | |||
2,181,246 | - | +0.0 | |||
2,181,269 | + | -0.9 | |||
2,181,277 | - | -0.2 | |||
2,182,704 | - | +1.4 | |||
2,182,977 | + | +3.2 | |||
2,182,977 | + | +1.2 | |||
2,182,985 | - | +1.0 | |||
2,183,000 | - | +2.7 | |||
2,183,015 | - | -0.3 | |||
2,183,026 | - | +2.1 | |||
2,183,264 | - | Dshi_2062 | 0.20 | -1.4 | |
2,183,546 | - | Dshi_2062 | 0.33 | +1.1 |
Or see this region's nucleotide sequence