Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1904

Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.0001 mg/ml
1,986,354	-				-0.5
1,986,371	-				+1.7
1,986,469	-		Dshi_1903	0.12	-0.3
1,986,543	+		Dshi_1903	0.20	-0.4
1,986,551	-		Dshi_1903	0.21	+0.2
1,986,551	-		Dshi_1903	0.21	-1.0
1,986,601	-		Dshi_1903	0.25	+0.1
1,986,658	-		Dshi_1903	0.31	-2.4
1,986,678	-		Dshi_1903	0.33	-2.1
1,986,692	+		Dshi_1903	0.34	-3.9
1,986,692	+		Dshi_1903	0.34	-0.8
1,986,692	+		Dshi_1903	0.34	+0.4
1,986,770	+		Dshi_1903	0.42	-3.3
1,986,939	+		Dshi_1903	0.59	+0.3
1,986,991	-		Dshi_1903	0.64	-0.6
1,987,052	-		Dshi_1903	0.70	+0.1
1,987,055	+		Dshi_1903	0.70	+0.6
1,987,063	-		Dshi_1903	0.71	-0.8
1,987,137	+		Dshi_1903	0.78	+1.0
1,987,227	+		Dshi_1903	0.87	-4.5
1,987,308	-				-0.3
1,987,326	+				+0.4
1,987,334	-				+0.8
1,987,382	-				-0.1
1,987,406	+				-0.3
1,987,600	-		Dshi_1904	0.19	-0.5
1,987,639	+		Dshi_1904	0.22	+0.9
1,987,652	-		Dshi_1904	0.23	+1.5
1,987,706	-		Dshi_1904	0.27	-1.3
1,987,744	+		Dshi_1904	0.30	-1.9
1,987,783	+		Dshi_1904	0.33	-2.3
1,987,847	+		Dshi_1904	0.38	-1.6
1,987,850	-		Dshi_1904	0.38	-0.1
1,987,980	-		Dshi_1904	0.48	-3.7
1,988,033	-		Dshi_1904	0.52	+1.0
1,988,044	+		Dshi_1904	0.53	-0.1
1,988,045	-		Dshi_1904	0.53	-0.9
1,988,089	-		Dshi_1904	0.56	-0.9
1,988,156	+		Dshi_1904	0.61	-2.1
1,988,156	+		Dshi_1904	0.61	+2.2
1,988,156	+		Dshi_1904	0.61	-1.8
1,988,156	+		Dshi_1904	0.61	-1.3
1,988,164	+		Dshi_1904	0.62	-2.1
1,988,164	-		Dshi_1904	0.62	+3.0
1,988,164	-		Dshi_1904	0.62	-1.6
1,988,164	-		Dshi_1904	0.62	+1.5
1,988,172	-		Dshi_1904	0.62	+1.9
1,988,240	-		Dshi_1904	0.68	-0.1
1,988,244	+		Dshi_1904	0.68	-2.7
1,988,245	+		Dshi_1904	0.68	-0.3
1,988,293	-		Dshi_1904	0.72	+3.6
1,988,367	-		Dshi_1904	0.77	+2.3
1,988,371	+		Dshi_1904	0.78	-0.9
1,988,379	-		Dshi_1904	0.78	-2.1
1,988,410	+		Dshi_1904	0.81	-1.6
1,988,419	+		Dshi_1904	0.81	+0.8
1,988,481	+		Dshi_1904	0.86	-0.7
1,988,489	-		Dshi_1904	0.87	-1.4
1,988,510	+		Dshi_1904	0.88	+0.2
1,988,512	+		Dshi_1904	0.88	+1.5
1,988,550	-				-2.7
1,988,572	-				-0.7
1,988,607	-				-0.3
1,988,617	-				-0.3
1,988,617	-				+2.9
1,988,624	+				-0.9
1,988,630	-				+3.0
1,988,665	-				+1.3
1,988,737	-				-0.4
1,988,769	-				+0.1
1,988,779	+				-0.6
1,988,787	-				-3.0
1,988,806	+				-0.1
1,988,806	+				+0.6
1,988,806	+				+1.5
1,988,811	+				-0.1
1,988,824	+				-0.4
1,988,824	+				+0.3
1,988,832	-				+0.0
1,988,832	-				+0.0
1,988,832	-				-0.5
1,988,861	+				+0.1
1,988,920	+				+1.1
1,988,920	+				+2.0
1,988,931	+				-0.8
1,988,976	+				+0.0
1,989,269	+				+0.1
1,989,303	+				+1.6
1,989,303	+				-0.3
1,989,344	-				-2.3
1,989,384	-		Dshi_1905	0.10	-0.0
1,989,400	+		Dshi_1905	0.12	+1.7
1,989,408	+		Dshi_1905	0.12	-2.3
1,989,444	+		Dshi_1905	0.16	+0.7
1,989,447	-		Dshi_1905	0.16	-1.5
1,989,460	+		Dshi_1905	0.17	-1.3
1,989,460	+		Dshi_1905	0.17	-0.6
1,989,461	+		Dshi_1905	0.17	+0.2
1,989,531	+		Dshi_1905	0.24	+2.5
1,989,572	+		Dshi_1905	0.27	+1.4
1,989,572	+		Dshi_1905	0.27	+0.7
1,989,591	-		Dshi_1905	0.29	+0.6
1,989,645	-		Dshi_1905	0.34	-1.9