Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1375
Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,427,674 | - | Dshi_1374 | 0.35 | -2.3 | |
1,427,805 | + | Dshi_1374 | 0.48 | +0.9 | |
1,427,919 | - | Dshi_1374 | 0.59 | -0.7 | |
1,428,013 | + | Dshi_1374 | 0.69 | +0.9 | |
1,428,073 | + | Dshi_1374 | 0.75 | -0.9 | |
1,428,075 | + | Dshi_1374 | 0.75 | +2.4 | |
1,428,310 | + | -0.6 | |||
1,428,310 | + | -1.7 | |||
1,428,434 | + | +3.2 | |||
1,428,466 | - | +1.0 | |||
1,429,153 | - | Dshi_1375 | 0.41 | +0.3 | |
1,429,231 | + | Dshi_1375 | 0.47 | -1.6 | |
1,429,648 | + | Dshi_1375 | 0.82 | -3.5 | |
1,429,954 | - | +3.7 | |||
1,430,128 | + | Dshi_1376 | 0.27 | +1.7 | |
1,430,169 | + | Dshi_1376 | 0.32 | -0.1 | |
1,430,172 | - | Dshi_1376 | 0.32 | -2.0 |
Or see this region's nucleotide sequence