Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0969 and Dshi_0970 overlap by 13 nucleotides Dshi_0970 and Dshi_0971 are separated by 11 nucleotides
Dshi_0969: Dshi_0969 - Mannitol dehydrogenase domain (RefSeq), at 990,448 to 991,947
_0969
Dshi_0970: Dshi_0970 - short-chain dehydrogenase/reductase SDR (RefSeq), at 991,935 to 992,426
_0970
Dshi_0971: Dshi_0971 - ABC transporter related (RefSeq), at 992,438 to 993,442
_0971
Position (kb) 991
992
993 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 990.996 kb on - strand, within Dshi_0969 at 991.086 kb on - strand, within Dshi_0969 at 991.286 kb on + strand, within Dshi_0969 at 991.313 kb on - strand, within Dshi_0969 at 991.315 kb on + strand, within Dshi_0969 at 991.511 kb on + strand, within Dshi_0969 at 991.749 kb on + strand, within Dshi_0969 at 991.813 kb on + strand at 991.873 kb on + strand at 991.909 kb on + strand at 991.968 kb on + strand at 991.984 kb on + strand at 992.010 kb on - strand, within Dshi_0970 at 992.012 kb on + strand, within Dshi_0970 at 992.046 kb on - strand, within Dshi_0970 at 992.090 kb on - strand, within Dshi_0970 at 992.171 kb on + strand, within Dshi_0970 at 992.183 kb on + strand, within Dshi_0970 at 992.220 kb on - strand, within Dshi_0970 at 992.263 kb on - strand, within Dshi_0970 at 992.326 kb on - strand, within Dshi_0970 at 992.347 kb on - strand, within Dshi_0970 at 992.614 kb on + strand, within Dshi_0971 at 992.636 kb on - strand, within Dshi_0971 at 992.849 kb on - strand, within Dshi_0971 at 992.853 kb on + strand, within Dshi_0971 at 992.863 kb on + strand, within Dshi_0971 at 992.864 kb on + strand, within Dshi_0971 at 992.892 kb on - strand, within Dshi_0971 at 992.897 kb on - strand, within Dshi_0971 at 993.007 kb on + strand, within Dshi_0971 at 993.104 kb on - strand, within Dshi_0971 at 993.222 kb on - strand, within Dshi_0971 at 993.324 kb on - strand, within Dshi_0971 at 993.373 kb on + strand at 993.408 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 990,996 - Dshi_0969 0.37 +0.4 991,086 - Dshi_0969 0.43 +0.7 991,286 + Dshi_0969 0.56 +1.5 991,313 - Dshi_0969 0.58 +0.3 991,315 + Dshi_0969 0.58 +3.6 991,511 + Dshi_0969 0.71 +1.1 991,749 + Dshi_0969 0.87 -0.3 991,813 + +1.5 991,873 + -2.2 991,909 + -0.2 991,968 + +0.5 991,984 + +0.4 992,010 - Dshi_0970 0.15 -2.2 992,012 + Dshi_0970 0.16 +0.8 992,046 - Dshi_0970 0.23 +0.3 992,090 - Dshi_0970 0.32 -2.0 992,171 + Dshi_0970 0.48 -0.9 992,183 + Dshi_0970 0.50 +2.2 992,220 - Dshi_0970 0.58 +1.7 992,263 - Dshi_0970 0.67 -0.2 992,326 - Dshi_0970 0.79 +1.8 992,347 - Dshi_0970 0.84 +1.1 992,614 + Dshi_0971 0.18 -2.5 992,636 - Dshi_0971 0.20 +3.4 992,849 - Dshi_0971 0.41 -0.0 992,853 + Dshi_0971 0.41 +1.1 992,863 + Dshi_0971 0.42 +0.8 992,864 + Dshi_0971 0.42 +0.2 992,892 - Dshi_0971 0.45 -0.2 992,897 - Dshi_0971 0.46 +0.2 993,007 + Dshi_0971 0.57 -1.2 993,104 - Dshi_0971 0.66 +1.3 993,222 - Dshi_0971 0.78 -2.1 993,324 - Dshi_0971 0.88 +1.3 993,373 + -2.5 993,408 - -0.3
Or see this region's nucleotide sequence