Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0745 and Dshi_0746 are separated by 97 nucleotides Dshi_0746 and Dshi_0747 are separated by 92 nucleotides Dshi_0747 and Dshi_0748 overlap by 8 nucleotides
Dshi_0745: Dshi_0745 - Redoxin domain protein (RefSeq), at 753,664 to 754,239
_0745
Dshi_0746: Dshi_0746 - MIP family channel protein (RefSeq), at 754,337 to 755,023
_0746
Dshi_0747: Dshi_0747 - lipoprotein releasing system, transmembrane protein, LolC/E family (RefSeq), at 755,116 to 756,402
_0747
Dshi_0748: Dshi_0748 - ABC transporter related (RefSeq), at 756,395 to 757,078
_0748
Position (kb) 755
756
757 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 754.223 kb on - strand at 754.223 kb on - strand at 754.337 kb on - strand at 754.469 kb on - strand, within Dshi_0746 at 754.475 kb on + strand, within Dshi_0746 at 754.483 kb on - strand, within Dshi_0746 at 754.486 kb on + strand, within Dshi_0746 at 754.549 kb on - strand, within Dshi_0746 at 754.554 kb on - strand, within Dshi_0746 at 754.629 kb on - strand, within Dshi_0746 at 754.654 kb on + strand, within Dshi_0746 at 754.658 kb on + strand, within Dshi_0746 at 754.707 kb on + strand, within Dshi_0746 at 754.913 kb on - strand, within Dshi_0746 at 754.935 kb on + strand, within Dshi_0746 at 754.937 kb on - strand, within Dshi_0746 at 754.962 kb on - strand at 754.991 kb on + strand at 754.996 kb on + strand at 755.030 kb on - strand at 757.073 kb on + strand at 757.073 kb on + strand at 757.073 kb on + strand at 757.073 kb on + strand at 757.081 kb on - strand at 757.148 kb on + strand at 757.156 kb on - strand at 757.170 kb on - strand at 757.193 kb on - strand at 757.234 kb on + strand at 757.302 kb on - strand at 757.348 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 754,223 - +0.4 754,223 - +0.3 754,337 - +3.2 754,469 - Dshi_0746 0.19 +1.3 754,475 + Dshi_0746 0.20 +0.9 754,483 - Dshi_0746 0.21 +3.2 754,486 + Dshi_0746 0.22 +3.2 754,549 - Dshi_0746 0.31 +0.1 754,554 - Dshi_0746 0.32 +0.5 754,629 - Dshi_0746 0.43 +0.9 754,654 + Dshi_0746 0.46 -0.1 754,658 + Dshi_0746 0.47 +1.5 754,707 + Dshi_0746 0.54 +3.0 754,913 - Dshi_0746 0.84 -0.5 754,935 + Dshi_0746 0.87 -0.4 754,937 - Dshi_0746 0.87 +0.4 754,962 - +2.1 754,991 + +2.5 754,996 + +3.5 755,030 - -1.1 757,073 + +0.0 757,073 + +1.2 757,073 + +1.6 757,073 + -2.4 757,081 - +1.1 757,148 + -0.1 757,156 - -0.0 757,170 - +1.5 757,193 - +0.6 757,234 + +0.9 757,302 - +0.3 757,348 + +2.2
Or see this region's nucleotide sequence