Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0637 and Dshi_0638 are separated by 191 nucleotides Dshi_0638 and Dshi_0639 overlap by 4 nucleotides Dshi_0639 and Dshi_0640 are separated by 101 nucleotides
Dshi_0637: Dshi_0637 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 636,471 to 637,394
_0637
Dshi_0638: Dshi_0638 - ABC transporter related (RefSeq), at 637,586 to 638,542
_0638
Dshi_0639: Dshi_0639 - ABC-2 type transporter (RefSeq), at 638,539 to 639,300
_0639
Dshi_0640: Dshi_0640 - peptidase S49 (RefSeq), at 639,402 to 640,199
_0640
Position (kb) 637
638
639 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 636.637 kb on - strand, within Dshi_0637 at 636.683 kb on - strand, within Dshi_0637 at 636.777 kb on - strand, within Dshi_0637 at 636.892 kb on + strand, within Dshi_0637 at 636.909 kb on + strand, within Dshi_0637 at 636.952 kb on - strand, within Dshi_0637 at 637.010 kb on - strand, within Dshi_0637 at 637.037 kb on + strand, within Dshi_0637 at 637.163 kb on - strand, within Dshi_0637 at 637.184 kb on - strand, within Dshi_0637 at 637.206 kb on + strand, within Dshi_0637 at 637.223 kb on + strand, within Dshi_0637 at 637.250 kb on + strand, within Dshi_0637 at 637.258 kb on + strand, within Dshi_0637 at 637.301 kb on + strand, within Dshi_0637 at 637.309 kb on - strand at 637.410 kb on - strand at 637.450 kb on + strand at 637.727 kb on - strand, within Dshi_0638 at 637.785 kb on + strand, within Dshi_0638 at 637.813 kb on + strand, within Dshi_0638 at 637.815 kb on + strand, within Dshi_0638 at 638.123 kb on - strand, within Dshi_0638 at 638.183 kb on - strand, within Dshi_0638 at 638.233 kb on - strand, within Dshi_0638 at 638.258 kb on - strand, within Dshi_0638 at 638.337 kb on + strand, within Dshi_0638 at 638.337 kb on + strand, within Dshi_0638 at 638.337 kb on + strand, within Dshi_0638 at 638.345 kb on - strand, within Dshi_0638 at 638.347 kb on + strand, within Dshi_0638 at 638.409 kb on - strand, within Dshi_0638 at 638.486 kb on - strand at 638.605 kb on - strand at 638.676 kb on + strand, within Dshi_0639 at 638.722 kb on + strand, within Dshi_0639 at 638.730 kb on - strand, within Dshi_0639 at 638.755 kb on - strand, within Dshi_0639 at 638.814 kb on + strand, within Dshi_0639 at 638.833 kb on + strand, within Dshi_0639 at 638.841 kb on - strand, within Dshi_0639 at 638.919 kb on - strand, within Dshi_0639 at 638.947 kb on + strand, within Dshi_0639 at 638.963 kb on + strand, within Dshi_0639 at 638.968 kb on + strand, within Dshi_0639 at 638.968 kb on + strand, within Dshi_0639 at 638.968 kb on + strand, within Dshi_0639 at 639.098 kb on - strand, within Dshi_0639 at 639.128 kb on + strand, within Dshi_0639 at 639.136 kb on + strand, within Dshi_0639 at 639.144 kb on - strand, within Dshi_0639 at 639.208 kb on + strand, within Dshi_0639 at 639.233 kb on + strand at 639.256 kb on - strand at 639.302 kb on - strand at 639.309 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 636,637 - Dshi_0637 0.18 +0.0 636,683 - Dshi_0637 0.23 +0.9 636,777 - Dshi_0637 0.33 -0.7 636,892 + Dshi_0637 0.46 +0.4 636,909 + Dshi_0637 0.47 -3.3 636,952 - Dshi_0637 0.52 +0.9 637,010 - Dshi_0637 0.58 +1.5 637,037 + Dshi_0637 0.61 +1.8 637,163 - Dshi_0637 0.75 -3.0 637,184 - Dshi_0637 0.77 +0.9 637,206 + Dshi_0637 0.80 +0.5 637,223 + Dshi_0637 0.81 +0.3 637,250 + Dshi_0637 0.84 -1.9 637,258 + Dshi_0637 0.85 -0.9 637,301 + Dshi_0637 0.90 +0.2 637,309 - +1.5 637,410 - +0.5 637,450 + -2.3 637,727 - Dshi_0638 0.15 +2.9 637,785 + Dshi_0638 0.21 -0.5 637,813 + Dshi_0638 0.24 +2.9 637,815 + Dshi_0638 0.24 +0.5 638,123 - Dshi_0638 0.56 +0.4 638,183 - Dshi_0638 0.62 +0.9 638,233 - Dshi_0638 0.68 -2.4 638,258 - Dshi_0638 0.70 +0.0 638,337 + Dshi_0638 0.78 +0.9 638,337 + Dshi_0638 0.78 -2.4 638,337 + Dshi_0638 0.78 -1.5 638,345 - Dshi_0638 0.79 +0.7 638,347 + Dshi_0638 0.80 +2.1 638,409 - Dshi_0638 0.86 -0.9 638,486 - -0.1 638,605 - -0.9 638,676 + Dshi_0639 0.18 -2.7 638,722 + Dshi_0639 0.24 +1.7 638,730 - Dshi_0639 0.25 -3.3 638,755 - Dshi_0639 0.28 +3.9 638,814 + Dshi_0639 0.36 +0.6 638,833 + Dshi_0639 0.39 +0.2 638,841 - Dshi_0639 0.40 +1.9 638,919 - Dshi_0639 0.50 +0.9 638,947 + Dshi_0639 0.54 -0.2 638,963 + Dshi_0639 0.56 +1.9 638,968 + Dshi_0639 0.56 -0.6 638,968 + Dshi_0639 0.56 -2.0 638,968 + Dshi_0639 0.56 -0.7 639,098 - Dshi_0639 0.73 +1.5 639,128 + Dshi_0639 0.77 -1.1 639,136 + Dshi_0639 0.78 -2.1 639,144 - Dshi_0639 0.79 -0.5 639,208 + Dshi_0639 0.88 -0.9 639,233 + +0.9 639,256 - +0.9 639,302 - +0.5 639,309 + -1.2
Or see this region's nucleotide sequence