Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0381 and Dshi_0382 are separated by 156 nucleotides Dshi_0382 and Dshi_0383 are separated by 124 nucleotides Dshi_0383 and Dshi_0384 are separated by 121 nucleotides
Dshi_0381: Dshi_0381 - ABC transporter related (RefSeq), at 363,531 to 364,355
_0381
Dshi_0382: Dshi_0382 - phenylacetate-CoA ligase, putative (RefSeq), at 364,512 to 365,732
_0382
Dshi_0383: Dshi_0383 - hypothetical protein (RefSeq), at 365,857 to 366,321
_0383
Dshi_0384: Dshi_0384 - hypothetical protein (RefSeq), at 366,443 to 366,901
_0384
Position (kb) 364
365
366 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 363.541 kb on - strand at 363.609 kb on + strand at 363.611 kb on + strand at 363.686 kb on - strand, within Dshi_0381 at 363.739 kb on + strand, within Dshi_0381 at 363.811 kb on - strand, within Dshi_0381 at 363.854 kb on - strand, within Dshi_0381 at 363.978 kb on + strand, within Dshi_0381 at 363.986 kb on - strand, within Dshi_0381 at 364.106 kb on - strand, within Dshi_0381 at 364.293 kb on - strand at 364.335 kb on + strand at 364.517 kb on + strand at 364.707 kb on + strand, within Dshi_0382 at 364.797 kb on - strand, within Dshi_0382 at 365.050 kb on + strand, within Dshi_0382 at 365.058 kb on - strand, within Dshi_0382 at 365.080 kb on + strand, within Dshi_0382 at 365.117 kb on + strand, within Dshi_0382 at 365.184 kb on - strand, within Dshi_0382 at 365.517 kb on + strand, within Dshi_0382 at 365.529 kb on - strand, within Dshi_0382 at 365.656 kb on - strand at 365.666 kb on + strand at 365.778 kb on - strand at 365.865 kb on + strand at 365.928 kb on - strand, within Dshi_0383 at 366.028 kb on - strand, within Dshi_0383 at 366.337 kb on + strand at 366.369 kb on + strand at 366.369 kb on + strand at 366.369 kb on + strand at 366.377 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 363,541 - -1.0 363,609 + -0.2 363,611 + +2.7 363,686 - Dshi_0381 0.19 -2.0 363,739 + Dshi_0381 0.25 -0.6 363,811 - Dshi_0381 0.34 +2.6 363,854 - Dshi_0381 0.39 +0.4 363,978 + Dshi_0381 0.54 -2.5 363,986 - Dshi_0381 0.55 -1.0 364,106 - Dshi_0381 0.70 -2.5 364,293 - +1.2 364,335 + +0.0 364,517 + +1.0 364,707 + Dshi_0382 0.16 +1.0 364,797 - Dshi_0382 0.23 -0.2 365,050 + Dshi_0382 0.44 +3.3 365,058 - Dshi_0382 0.45 +2.6 365,080 + Dshi_0382 0.47 -2.3 365,117 + Dshi_0382 0.50 -0.3 365,184 - Dshi_0382 0.55 +2.6 365,517 + Dshi_0382 0.82 -0.6 365,529 - Dshi_0382 0.83 +3.8 365,656 - -0.3 365,666 + +1.0 365,778 - -0.8 365,865 + +1.0 365,928 - Dshi_0383 0.15 -2.2 366,028 - Dshi_0383 0.37 +0.5 366,337 + -2.8 366,369 + -0.6 366,369 + -0.6 366,369 + +0.3 366,377 - -0.0
Or see this region's nucleotide sequence