Experiment: m.b. Benzalkonium Chloride 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0255 and Dshi_0256 are separated by 78 nucleotides Dshi_0256 and Dshi_0257 are separated by 59 nucleotides Dshi_0257 and Dshi_0258 are separated by 194 nucleotides Dshi_0258 and Dshi_0259 are separated by 201 nucleotides
Dshi_0255: Dshi_0255 - protein of unknown function DUF1013 (RefSeq), at 253,588 to 254,340
_0255
Dshi_0256: Dshi_0256 - hypothetical protein (RefSeq), at 254,419 to 254,667
_0256
Dshi_0257: Dshi_0257 - peptidase S8 and S53 subtilisin kexin sedolisin (RefSeq), at 254,727 to 256,076
_0257
Dshi_0258: Dshi_0258 - preprotein translocase, SecE subunit (RefSeq), at 256,271 to 256,471
_0258
Dshi_0259: Dshi_0259 - NusG antitermination factor (RefSeq), at 256,673 to 257,206
_0259
Position (kb) 254
255
256
257 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 254.171 kb on + strand, within Dshi_0255 at 254.320 kb on - strand at 254.413 kb on - strand at 254.687 kb on - strand at 254.799 kb on - strand at 254.873 kb on - strand, within Dshi_0257 at 254.955 kb on + strand, within Dshi_0257 at 255.010 kb on - strand, within Dshi_0257 at 255.017 kb on - strand, within Dshi_0257 at 255.088 kb on + strand, within Dshi_0257 at 255.231 kb on - strand, within Dshi_0257 at 255.244 kb on + strand, within Dshi_0257 at 255.306 kb on + strand, within Dshi_0257 at 255.357 kb on - strand, within Dshi_0257 at 255.497 kb on + strand, within Dshi_0257 at 255.531 kb on - strand, within Dshi_0257 at 255.631 kb on + strand, within Dshi_0257 at 255.771 kb on - strand, within Dshi_0257 at 255.785 kb on + strand, within Dshi_0257 at 255.838 kb on - strand, within Dshi_0257 at 255.849 kb on - strand, within Dshi_0257 at 255.877 kb on + strand, within Dshi_0257 at 255.890 kb on + strand, within Dshi_0257 at 255.914 kb on - strand, within Dshi_0257 at 255.952 kb on + strand at 255.960 kb on - strand at 255.960 kb on - strand at 255.960 kb on - strand at 255.976 kb on - strand at 256.021 kb on + strand at 256.058 kb on + strand at 256.058 kb on - strand at 256.058 kb on - strand at 256.066 kb on + strand at 256.069 kb on - strand at 256.120 kb on + strand at 256.125 kb on + strand at 256.125 kb on + strand at 256.133 kb on - strand at 256.137 kb on + strand at 256.138 kb on - strand at 256.166 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.192 kb on - strand at 256.470 kb on + strand at 256.510 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0001 mg/ml remove 254,171 + Dshi_0255 0.77 +0.9 254,320 - +2.3 254,413 - +0.7 254,687 - +3.0 254,799 - +1.0 254,873 - Dshi_0257 0.11 +1.0 254,955 + Dshi_0257 0.17 -0.5 255,010 - Dshi_0257 0.21 +0.5 255,017 - Dshi_0257 0.21 -1.5 255,088 + Dshi_0257 0.27 +2.2 255,231 - Dshi_0257 0.37 +1.1 255,244 + Dshi_0257 0.38 +4.4 255,306 + Dshi_0257 0.43 +1.0 255,357 - Dshi_0257 0.47 +1.6 255,497 + Dshi_0257 0.57 +0.9 255,531 - Dshi_0257 0.60 +3.0 255,631 + Dshi_0257 0.67 +0.1 255,771 - Dshi_0257 0.77 +0.8 255,785 + Dshi_0257 0.78 -3.2 255,838 - Dshi_0257 0.82 +1.9 255,849 - Dshi_0257 0.83 +1.0 255,877 + Dshi_0257 0.85 -0.3 255,890 + Dshi_0257 0.86 -0.5 255,914 - Dshi_0257 0.88 +1.0 255,952 + -0.2 255,960 - +3.9 255,960 - +1.2 255,960 - +1.0 255,976 - +2.6 256,021 + -1.4 256,058 + -0.6 256,058 - +2.6 256,058 - +0.6 256,066 + +2.6 256,069 - -0.3 256,120 + +0.3 256,125 + -0.8 256,125 + +1.0 256,133 - -1.8 256,137 + +0.5 256,138 - -0.4 256,166 + -0.5 256,183 + -0.0 256,183 + -2.4 256,183 + +4.5 256,183 + +1.9 256,183 + +0.4 256,183 + -0.7 256,183 + +1.0 256,183 + -0.4 256,191 - +1.7 256,191 - -0.5 256,191 - +0.0 256,191 - +0.6 256,191 - -3.0 256,192 - -0.2 256,470 + +1.0 256,510 - +0.3
Or see this region's nucleotide sequence