Experiment: L-Isoleucine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_969 and HP15_970 overlap by 75 nucleotides HP15_970 and HP15_971 are separated by 64 nucleotides HP15_971 and HP15_972 are separated by 191 nucleotides
HP15_969: HP15_969 - hypothetical protein, at 982,513 to 983,028
_969
HP15_970: HP15_970 - hypothetical protein, at 982,954 to 983,067
_970
HP15_971: HP15_971 - NIPSNAP family containing protein, at 983,132 to 983,437
_971
HP15_972: HP15_972 - hypothetical protein, at 983,629 to 984,114
_972
Position (kb) 982
983
984 Strain fitness (log2 ratio) -2
-1
0
1
2 at 981.963 kb on - strand at 981.965 kb on + strand at 981.973 kb on - strand at 981.973 kb on - strand at 981.973 kb on - strand at 982.135 kb on - strand at 982.164 kb on + strand at 982.172 kb on - strand at 982.238 kb on - strand at 982.267 kb on + strand at 982.399 kb on - strand at 982.423 kb on + strand at 982.423 kb on + strand at 982.426 kb on - strand at 982.431 kb on + strand at 982.466 kb on + strand at 982.466 kb on + strand at 982.497 kb on + strand at 982.538 kb on - strand at 982.608 kb on + strand, within HP15_969 at 982.739 kb on - strand, within HP15_969 at 982.761 kb on + strand, within HP15_969 at 982.815 kb on + strand, within HP15_969 at 982.823 kb on - strand, within HP15_969 at 982.823 kb on - strand, within HP15_969 at 982.823 kb on - strand, within HP15_969 at 982.823 kb on - strand, within HP15_969 at 982.830 kb on + strand, within HP15_969 at 982.915 kb on + strand, within HP15_969 at 982.915 kb on + strand, within HP15_969 at 982.923 kb on - strand, within HP15_969 at 982.923 kb on - strand, within HP15_969 at 982.923 kb on - strand, within HP15_969 at 982.937 kb on - strand, within HP15_969 at 982.937 kb on - strand, within HP15_969 at 983.033 kb on + strand, within HP15_970 at 983.035 kb on + strand, within HP15_970 at 983.048 kb on - strand, within HP15_970 at 983.134 kb on - strand at 983.165 kb on - strand, within HP15_971 at 983.175 kb on - strand, within HP15_971 at 983.200 kb on + strand, within HP15_971 at 983.208 kb on - strand, within HP15_971 at 983.223 kb on - strand, within HP15_971 at 983.224 kb on - strand, within HP15_971 at 983.326 kb on - strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.400 kb on + strand, within HP15_971 at 983.403 kb on - strand, within HP15_971 at 983.472 kb on - strand at 983.491 kb on + strand at 983.504 kb on + strand at 983.530 kb on - strand at 983.657 kb on - strand at 983.709 kb on - strand, within HP15_972 at 983.721 kb on - strand, within HP15_972 at 983.871 kb on + strand, within HP15_972 at 984.040 kb on + strand, within HP15_972 at 984.047 kb on + strand, within HP15_972
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine as (N) remove 981,963 - +0.1 981,965 + +0.3 981,973 - +0.5 981,973 - -0.5 981,973 - -1.5 982,135 - -0.2 982,164 + -0.3 982,172 - +0.0 982,238 - +1.7 982,267 + -0.6 982,399 - +0.7 982,423 + +1.9 982,423 + -0.3 982,426 - -0.4 982,431 + -0.8 982,466 + -0.2 982,466 + +1.3 982,497 + -0.4 982,538 - -0.1 982,608 + HP15_969 0.18 -0.2 982,739 - HP15_969 0.44 +0.4 982,761 + HP15_969 0.48 -0.3 982,815 + HP15_969 0.59 -0.3 982,823 - HP15_969 0.60 -0.6 982,823 - HP15_969 0.60 -0.7 982,823 - HP15_969 0.60 +0.4 982,823 - HP15_969 0.60 +0.0 982,830 + HP15_969 0.61 +0.9 982,915 + HP15_969 0.78 -0.3 982,915 + HP15_969 0.78 -0.4 982,923 - HP15_969 0.79 +0.2 982,923 - HP15_969 0.79 +0.5 982,923 - HP15_969 0.79 -0.4 982,937 - HP15_969 0.82 +0.8 982,937 - HP15_969 0.82 +0.3 983,033 + HP15_970 0.69 -0.5 983,035 + HP15_970 0.71 +0.6 983,048 - HP15_970 0.82 -0.6 983,134 - -2.4 983,165 - HP15_971 0.11 +0.7 983,175 - HP15_971 0.14 +0.3 983,200 + HP15_971 0.22 -0.6 983,208 - HP15_971 0.25 -0.5 983,223 - HP15_971 0.30 +0.8 983,224 - HP15_971 0.30 +0.4 983,326 - HP15_971 0.63 +0.6 983,393 + HP15_971 0.85 -0.8 983,393 + HP15_971 0.85 +0.4 983,393 + HP15_971 0.85 -0.7 983,393 + HP15_971 0.85 +0.1 983,400 + HP15_971 0.88 +1.1 983,403 - HP15_971 0.89 +0.0 983,472 - +0.7 983,491 + -0.0 983,504 + -1.0 983,530 - +0.4 983,657 - -0.9 983,709 - HP15_972 0.16 -0.1 983,721 - HP15_972 0.19 +1.0 983,871 + HP15_972 0.50 +0.2 984,040 + HP15_972 0.85 +0.5 984,047 + HP15_972 0.86 -0.9
Or see this region's nucleotide sequence