Strain Fitness in Marinobacter adhaerens HP15 around HP15_3567

Experiment: L-Isoleucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3566 and HP15_3567 overlap by 15 nucleotidesHP15_3567 and HP15_3568 are separated by 291 nucleotides HP15_3566: HP15_3566 - MATE efflux family protein, at 3,756,557 to 3,757,894 _3566 HP15_3567: HP15_3567 - conserved hypothetical protein, at 3,757,880 to 3,758,305 _3567 HP15_3568: HP15_3568 - beta-lactamase domain protein, at 3,758,597 to 3,760,234 _3568 Position (kb) 3757 3758 3759Strain fitness (log2 ratio) -2 -1 0 1at 3756.981 kb on + strand, within HP15_3566at 3756.995 kb on - strand, within HP15_3566at 3757.002 kb on - strand, within HP15_3566at 3757.055 kb on - strand, within HP15_3566at 3757.075 kb on - strand, within HP15_3566at 3757.075 kb on - strand, within HP15_3566at 3757.087 kb on + strand, within HP15_3566at 3757.164 kb on + strand, within HP15_3566at 3757.209 kb on + strand, within HP15_3566at 3757.217 kb on - strand, within HP15_3566at 3757.224 kb on + strand, within HP15_3566at 3757.232 kb on - strand, within HP15_3566at 3757.250 kb on - strand, within HP15_3566at 3757.269 kb on + strand, within HP15_3566at 3757.270 kb on - strand, within HP15_3566at 3757.367 kb on - strand, within HP15_3566at 3757.581 kb on + strand, within HP15_3566at 3757.608 kb on + strand, within HP15_3566at 3757.649 kb on - strand, within HP15_3566at 3757.701 kb on + strand, within HP15_3566at 3757.711 kb on - strand, within HP15_3566at 3757.765 kb on + strandat 3757.792 kb on - strandat 3757.792 kb on - strandat 3758.047 kb on + strand, within HP15_3567at 3758.231 kb on - strand, within HP15_3567at 3758.231 kb on - strand, within HP15_3567at 3758.300 kb on + strandat 3758.404 kb on + strandat 3758.412 kb on - strandat 3758.427 kb on - strandat 3758.476 kb on - strandat 3758.476 kb on - strandat 3758.594 kb on + strandat 3758.649 kb on + strandat 3758.697 kb on - strandat 3758.799 kb on - strand, within HP15_3568at 3758.819 kb on + strand, within HP15_3568at 3758.827 kb on - strand, within HP15_3568at 3758.827 kb on - strand, within HP15_3568at 3758.827 kb on - strand, within HP15_3568at 3758.847 kb on + strand, within HP15_3568at 3758.855 kb on - strand, within HP15_3568at 3758.887 kb on + strand, within HP15_3568at 3758.924 kb on + strand, within HP15_3568at 3759.007 kb on + strand, within HP15_3568at 3759.024 kb on + strand, within HP15_3568at 3759.091 kb on - strand, within HP15_3568at 3759.138 kb on - strand, within HP15_3568at 3759.146 kb on + strand, within HP15_3568at 3759.173 kb on + strand, within HP15_3568at 3759.181 kb on - strand, within HP15_3568at 3759.215 kb on - strand, within HP15_3568at 3759.242 kb on - strand, within HP15_3568

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine as (N)
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3,756,981 + HP15_3566 0.32 +0.7
3,756,995 - HP15_3566 0.33 -0.4
3,757,002 - HP15_3566 0.33 -0.0
3,757,055 - HP15_3566 0.37 +0.8
3,757,075 - HP15_3566 0.39 +0.3
3,757,075 - HP15_3566 0.39 -0.1
3,757,087 + HP15_3566 0.40 -0.4
3,757,164 + HP15_3566 0.45 +0.6
3,757,209 + HP15_3566 0.49 -0.5
3,757,217 - HP15_3566 0.49 +0.7
3,757,224 + HP15_3566 0.50 -0.4
3,757,232 - HP15_3566 0.50 +0.8
3,757,250 - HP15_3566 0.52 +1.5
3,757,269 + HP15_3566 0.53 -1.1
3,757,270 - HP15_3566 0.53 -0.6
3,757,367 - HP15_3566 0.61 -0.0
3,757,581 + HP15_3566 0.77 -0.1
3,757,608 + HP15_3566 0.79 +0.4
3,757,649 - HP15_3566 0.82 +0.7
3,757,701 + HP15_3566 0.86 +0.6
3,757,711 - HP15_3566 0.86 +0.6
3,757,765 + +0.4
3,757,792 - +0.7
3,757,792 - -0.5
3,758,047 + HP15_3567 0.39 -1.3
3,758,231 - HP15_3567 0.82 +0.0
3,758,231 - HP15_3567 0.82 -2.1
3,758,300 + -0.0
3,758,404 + +0.4
3,758,412 - +0.4
3,758,427 - -2.7
3,758,476 - +0.9
3,758,476 - -0.3
3,758,594 + -1.2
3,758,649 + -0.2
3,758,697 - -0.3
3,758,799 - HP15_3568 0.12 +0.7
3,758,819 + HP15_3568 0.14 +1.4
3,758,827 - HP15_3568 0.14 +0.4
3,758,827 - HP15_3568 0.14 +1.1
3,758,827 - HP15_3568 0.14 +0.6
3,758,847 + HP15_3568 0.15 +0.0
3,758,855 - HP15_3568 0.16 +0.2
3,758,887 + HP15_3568 0.18 -0.2
3,758,924 + HP15_3568 0.20 -1.2
3,759,007 + HP15_3568 0.25 +0.1
3,759,024 + HP15_3568 0.26 -1.5
3,759,091 - HP15_3568 0.30 -1.5
3,759,138 - HP15_3568 0.33 +0.1
3,759,146 + HP15_3568 0.34 -0.4
3,759,173 + HP15_3568 0.35 +0.1
3,759,181 - HP15_3568 0.36 +0.9
3,759,215 - HP15_3568 0.38 -0.2
3,759,242 - HP15_3568 0.39 -0.3

Or see this region's nucleotide sequence