Strain Fitness in Marinobacter adhaerens HP15 around HP15_3078

Experiment: L-Isoleucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3077 and HP15_3078 are separated by 80 nucleotidesHP15_3078 and HP15_3079 are separated by 194 nucleotides HP15_3077: HP15_3077 - carbamoyl-phosphate synthase, large subunit, at 3,230,289 to 3,233,507 _3077 HP15_3078: HP15_3078 - carbamoyl-phosphate synthase small chain, at 3,233,588 to 3,234,718 _3078 HP15_3079: HP15_3079 - dihydrodipicolinate reductase, at 3,234,913 to 3,235,713 _3079 Position (kb) 3233 3234 3235Strain fitness (log2 ratio) -2 -1 0 1at 3233.726 kb on + strand, within HP15_3078at 3234.489 kb on - strand, within HP15_3078

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine as (N)
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3,233,726 + HP15_3078 0.12 -2.7
3,234,489 - HP15_3078 0.80 -2.3

Or see this region's nucleotide sequence