Strain Fitness in Marinobacter adhaerens HP15 around HP15_2466

Experiment: L-Isoleucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2465 and HP15_2466 are separated by 185 nucleotidesHP15_2466 and HP15_2467 are separated by 444 nucleotides HP15_2465: HP15_2465 - tRNA guanosine-2'-O-methyltransferase, at 2,605,002 to 2,605,739 _2465 HP15_2466: HP15_2466 - tRNA-i(6)A37 thiotransferase enzyme MiaB, at 2,605,925 to 2,607,271 _2466 HP15_2467: HP15_2467 - PhoH family protein, at 2,607,716 to 2,608,699 _2467 Position (kb) 2605 2606 2607 2608Strain fitness (log2 ratio) -2 -1 0 1at 2605.031 kb on + strandat 2605.091 kb on - strand, within HP15_2465at 2605.091 kb on - strand, within HP15_2465at 2605.156 kb on + strand, within HP15_2465at 2605.258 kb on + strand, within HP15_2465at 2605.266 kb on - strand, within HP15_2465at 2605.281 kb on + strand, within HP15_2465at 2605.373 kb on - strand, within HP15_2465at 2605.388 kb on + strand, within HP15_2465at 2605.416 kb on - strand, within HP15_2465at 2605.446 kb on + strand, within HP15_2465at 2605.463 kb on + strand, within HP15_2465at 2605.942 kb on + strandat 2605.949 kb on + strandat 2605.997 kb on - strandat 2605.997 kb on - strandat 2606.198 kb on + strand, within HP15_2466at 2606.287 kb on + strand, within HP15_2466at 2606.295 kb on + strand, within HP15_2466at 2606.295 kb on - strand, within HP15_2466at 2606.450 kb on - strand, within HP15_2466at 2606.677 kb on - strand, within HP15_2466at 2606.734 kb on - strand, within HP15_2466at 2606.767 kb on + strand, within HP15_2466at 2606.888 kb on - strand, within HP15_2466at 2607.070 kb on + strand, within HP15_2466at 2607.106 kb on + strand, within HP15_2466at 2607.106 kb on + strand, within HP15_2466at 2607.114 kb on - strand, within HP15_2466at 2607.315 kb on + strandat 2607.316 kb on + strandat 2607.466 kb on + strandat 2607.478 kb on + strandat 2607.520 kb on - strandat 2607.585 kb on + strandat 2608.025 kb on + strand, within HP15_2467at 2608.033 kb on + strand, within HP15_2467at 2608.041 kb on - strand, within HP15_2467

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine as (N)
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2,605,031 + +0.3
2,605,091 - HP15_2465 0.12 +0.8
2,605,091 - HP15_2465 0.12 +1.1
2,605,156 + HP15_2465 0.21 -0.7
2,605,258 + HP15_2465 0.35 -0.5
2,605,266 - HP15_2465 0.36 +0.5
2,605,281 + HP15_2465 0.38 -0.4
2,605,373 - HP15_2465 0.50 +0.7
2,605,388 + HP15_2465 0.52 -0.0
2,605,416 - HP15_2465 0.56 -0.4
2,605,446 + HP15_2465 0.60 -0.8
2,605,463 + HP15_2465 0.62 +0.6
2,605,942 + -1.3
2,605,949 + +0.1
2,605,997 - -1.2
2,605,997 - -0.9
2,606,198 + HP15_2466 0.20 -1.4
2,606,287 + HP15_2466 0.27 -1.1
2,606,295 + HP15_2466 0.27 -0.7
2,606,295 - HP15_2466 0.27 +0.1
2,606,450 - HP15_2466 0.39 +0.3
2,606,677 - HP15_2466 0.56 -0.8
2,606,734 - HP15_2466 0.60 -0.3
2,606,767 + HP15_2466 0.63 -0.3
2,606,888 - HP15_2466 0.71 +0.2
2,607,070 + HP15_2466 0.85 +0.2
2,607,106 + HP15_2466 0.88 -1.7
2,607,106 + HP15_2466 0.88 -0.4
2,607,114 - HP15_2466 0.88 -0.8
2,607,315 + -0.2
2,607,316 + -0.4
2,607,466 + -1.9
2,607,478 + -0.4
2,607,520 - +0.1
2,607,585 + -0.8
2,608,025 + HP15_2467 0.31 +0.2
2,608,033 + HP15_2467 0.32 -0.3
2,608,041 - HP15_2467 0.33 +1.3

Or see this region's nucleotide sequence