Experiment: L-Isoleucine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2433 and HP15_2434 overlap by 4 nucleotides HP15_2434 and HP15_2435 are separated by 34 nucleotides HP15_2435 and HP15_2436 overlap by 4 nucleotides HP15_2436 and HP15_2437 are separated by 188 nucleotides
HP15_2433: HP15_2433 - toluene tolerance family protein, at 2,573,418 to 2,574,107
_2433
HP15_2434: HP15_2434 - mammalian cell entry related domain protein, at 2,574,104 to 2,574,553
_2434
HP15_2435: HP15_2435 - ABC-type transport system involved in resistance to organic solvents, permease component, at 2,574,588 to 2,575,370
_2435
HP15_2436: HP15_2436 - toluene tolerance ABC efflux transporter, ATP-binding protein, at 2,575,367 to 2,576,179
_2436
HP15_2437: HP15_2437 - KpsF/GutQ family protein, at 2,576,368 to 2,577,347
_2437
Position (kb)
2574
2575
2576 Strain fitness (log2 ratio)
-2
-1
0
1 at 2573.601 kb on + strand, within HP15_2433 at 2573.607 kb on - strand, within HP15_2433 at 2573.607 kb on - strand, within HP15_2433 at 2574.157 kb on - strand, within HP15_2434 at 2574.179 kb on - strand, within HP15_2434 at 2574.238 kb on + strand, within HP15_2434 at 2574.256 kb on - strand, within HP15_2434 at 2574.274 kb on - strand, within HP15_2434 at 2574.361 kb on + strand, within HP15_2434 at 2574.369 kb on - strand, within HP15_2434 at 2574.369 kb on - strand, within HP15_2434 at 2574.560 kb on - strand at 2574.617 kb on + strand at 2574.705 kb on + strand, within HP15_2435 at 2574.713 kb on - strand, within HP15_2435 at 2574.732 kb on + strand, within HP15_2435 at 2574.771 kb on + strand, within HP15_2435 at 2574.803 kb on + strand, within HP15_2435 at 2574.836 kb on + strand, within HP15_2435 at 2574.853 kb on + strand, within HP15_2435 at 2575.104 kb on + strand, within HP15_2435 at 2575.137 kb on + strand, within HP15_2435 at 2575.142 kb on + strand, within HP15_2435 at 2575.155 kb on - strand, within HP15_2435 at 2575.161 kb on + strand, within HP15_2435 at 2575.225 kb on + strand, within HP15_2435 at 2575.233 kb on - strand, within HP15_2435 at 2575.233 kb on - strand, within HP15_2435 at 2575.360 kb on - strand at 2575.377 kb on + strand at 2575.495 kb on + strand, within HP15_2436 at 2575.500 kb on + strand, within HP15_2436 at 2575.503 kb on - strand, within HP15_2436 at 2575.603 kb on - strand, within HP15_2436 at 2575.613 kb on + strand, within HP15_2436 at 2575.629 kb on + strand, within HP15_2436 at 2575.718 kb on + strand, within HP15_2436 at 2575.721 kb on - strand, within HP15_2436 at 2575.786 kb on + strand, within HP15_2436 at 2575.910 kb on + strand, within HP15_2436 at 2575.943 kb on + strand, within HP15_2436 at 2575.951 kb on - strand, within HP15_2436 at 2575.987 kb on + strand, within HP15_2436 at 2576.007 kb on + strand, within HP15_2436 at 2576.073 kb on - strand, within HP15_2436 at 2576.073 kb on - strand, within HP15_2436 at 2576.210 kb on + strand at 2576.260 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine as (N) remove 2,573,601 + HP15_2433 0.27 -1.1 2,573,607 - HP15_2433 0.27 +1.0 2,573,607 - HP15_2433 0.27 +1.3 2,574,157 - HP15_2434 0.12 -1.3 2,574,179 - HP15_2434 0.17 +0.9 2,574,238 + HP15_2434 0.30 -0.4 2,574,256 - HP15_2434 0.34 +0.2 2,574,274 - HP15_2434 0.38 -0.0 2,574,361 + HP15_2434 0.57 -0.5 2,574,369 - HP15_2434 0.59 -0.1 2,574,369 - HP15_2434 0.59 +0.3 2,574,560 - +0.8 2,574,617 + +0.8 2,574,705 + HP15_2435 0.15 -0.6 2,574,713 - HP15_2435 0.16 -2.1 2,574,732 + HP15_2435 0.18 -0.3 2,574,771 + HP15_2435 0.23 +0.2 2,574,803 + HP15_2435 0.27 -0.2 2,574,836 + HP15_2435 0.32 +0.2 2,574,853 + HP15_2435 0.34 -0.8 2,575,104 + HP15_2435 0.66 -1.3 2,575,137 + HP15_2435 0.70 -0.9 2,575,142 + HP15_2435 0.71 -1.4 2,575,155 - HP15_2435 0.72 -0.6 2,575,161 + HP15_2435 0.73 -0.2 2,575,225 + HP15_2435 0.81 -1.2 2,575,233 - HP15_2435 0.82 -0.9 2,575,233 - HP15_2435 0.82 -0.1 2,575,360 - -2.1 2,575,377 + +0.6 2,575,495 + HP15_2436 0.16 -0.3 2,575,500 + HP15_2436 0.16 -1.1 2,575,503 - HP15_2436 0.17 -0.1 2,575,603 - HP15_2436 0.29 +0.1 2,575,613 + HP15_2436 0.30 -0.0 2,575,629 + HP15_2436 0.32 -0.1 2,575,718 + HP15_2436 0.43 +0.7 2,575,721 - HP15_2436 0.44 +0.5 2,575,786 + HP15_2436 0.52 -0.1 2,575,910 + HP15_2436 0.67 +0.3 2,575,943 + HP15_2436 0.71 -1.6 2,575,951 - HP15_2436 0.72 -0.3 2,575,987 + HP15_2436 0.76 +0.3 2,576,007 + HP15_2436 0.79 -0.2 2,576,073 - HP15_2436 0.87 -0.5 2,576,073 - HP15_2436 0.87 +0.4 2,576,210 + -0.3 2,576,260 + +0.4
Or see this region's nucleotide sequence