Strain Fitness in Marinobacter adhaerens HP15 around HP15_2383

Experiment: L-Isoleucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2382 and HP15_2383 are separated by 74 nucleotidesHP15_2383 and HP15_2384 are separated by 208 nucleotidesHP15_2384 and HP15_2385 are separated by 51 nucleotides HP15_2382: HP15_2382 - UDP-N-acetylglucosamine 2-epimerase, at 2,511,217 to 2,512,350 _2382 HP15_2383: HP15_2383 - nucleotide sugar epimerase/dehydratase, at 2,512,425 to 2,514,233 _2383 HP15_2384: HP15_2384 - sugar transferase, at 2,514,442 to 2,514,999 _2384 HP15_2385: HP15_2385 - UDP-glucose 6-dehydrogenase, at 2,515,051 to 2,516,223 _2385 Position (kb) 2512 2513 2514 2515Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2511.568 kb on - strand, within HP15_2382at 2511.583 kb on + strand, within HP15_2382at 2511.626 kb on - strand, within HP15_2382at 2511.626 kb on - strand, within HP15_2382at 2511.629 kb on + strand, within HP15_2382at 2511.848 kb on - strand, within HP15_2382at 2512.147 kb on - strand, within HP15_2382at 2512.151 kb on - strand, within HP15_2382at 2512.198 kb on + strand, within HP15_2382at 2512.210 kb on + strand, within HP15_2382at 2512.218 kb on - strand, within HP15_2382at 2512.259 kb on - strandat 2512.259 kb on - strandat 2512.305 kb on + strandat 2512.380 kb on - strandat 2512.469 kb on - strandat 2512.623 kb on + strand, within HP15_2383at 2512.625 kb on + strand, within HP15_2383at 2512.636 kb on + strand, within HP15_2383at 2512.668 kb on + strand, within HP15_2383at 2512.834 kb on + strand, within HP15_2383at 2512.851 kb on + strand, within HP15_2383at 2512.853 kb on + strand, within HP15_2383at 2512.909 kb on - strand, within HP15_2383at 2512.909 kb on - strandat 2512.909 kb on - strand, within HP15_2383at 2512.909 kb on - strand, within HP15_2383at 2512.976 kb on - strand, within HP15_2383at 2512.999 kb on - strand, within HP15_2383at 2513.054 kb on + strand, within HP15_2383at 2513.081 kb on + strand, within HP15_2383at 2513.112 kb on - strand, within HP15_2383at 2513.128 kb on + strand, within HP15_2383at 2513.279 kb on - strand, within HP15_2383at 2513.327 kb on + strand, within HP15_2383at 2513.335 kb on - strand, within HP15_2383at 2513.343 kb on - strand, within HP15_2383at 2513.368 kb on - strand, within HP15_2383at 2513.375 kb on - strand, within HP15_2383at 2513.377 kb on - strand, within HP15_2383at 2513.488 kb on - strand, within HP15_2383at 2513.514 kb on - strand, within HP15_2383at 2513.514 kb on - strand, within HP15_2383at 2513.524 kb on - strand, within HP15_2383at 2513.524 kb on - strand, within HP15_2383at 2513.542 kb on - strand, within HP15_2383at 2513.547 kb on - strand, within HP15_2383at 2513.554 kb on - strand, within HP15_2383at 2513.689 kb on + strand, within HP15_2383at 2513.689 kb on - strand, within HP15_2383at 2513.695 kb on + strand, within HP15_2383at 2513.733 kb on + strand, within HP15_2383at 2513.739 kb on + strand, within HP15_2383at 2513.777 kb on + strand, within HP15_2383at 2513.798 kb on + strand, within HP15_2383at 2513.806 kb on + strand, within HP15_2383at 2513.808 kb on + strand, within HP15_2383at 2513.857 kb on + strand, within HP15_2383at 2513.876 kb on + strand, within HP15_2383at 2513.876 kb on + strand, within HP15_2383at 2513.975 kb on - strand, within HP15_2383at 2514.000 kb on + strand, within HP15_2383at 2514.000 kb on + strand, within HP15_2383at 2514.001 kb on + strand, within HP15_2383at 2514.006 kb on + strand, within HP15_2383at 2514.008 kb on + strand, within HP15_2383at 2514.014 kb on - strand, within HP15_2383at 2514.058 kb on - strandat 2514.098 kb on + strandat 2514.108 kb on - strandat 2514.195 kb on + strandat 2514.217 kb on - strandat 2514.240 kb on + strandat 2514.240 kb on - strandat 2514.253 kb on - strandat 2514.355 kb on - strandat 2515.026 kb on - strandat 2515.036 kb on - strandat 2515.046 kb on - strandat 2515.084 kb on - strandat 2515.181 kb on + strand, within HP15_2385

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine as (N)
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2,511,568 - HP15_2382 0.31 -0.3
2,511,583 + HP15_2382 0.32 -0.2
2,511,626 - HP15_2382 0.36 +0.8
2,511,626 - HP15_2382 0.36 +0.4
2,511,629 + HP15_2382 0.36 +0.2
2,511,848 - HP15_2382 0.56 +0.3
2,512,147 - HP15_2382 0.82 -0.1
2,512,151 - HP15_2382 0.82 +0.4
2,512,198 + HP15_2382 0.87 -0.9
2,512,210 + HP15_2382 0.88 -0.1
2,512,218 - HP15_2382 0.88 -0.1
2,512,259 - +0.4
2,512,259 - -0.0
2,512,305 + -0.0
2,512,380 - +1.3
2,512,469 - -0.6
2,512,623 + HP15_2383 0.11 -2.3
2,512,625 + HP15_2383 0.11 -2.0
2,512,636 + HP15_2383 0.12 -4.5
2,512,668 + HP15_2383 0.13 -4.3
2,512,834 + HP15_2383 0.23 -2.8
2,512,851 + HP15_2383 0.24 -1.4
2,512,853 + HP15_2383 0.24 -4.2
2,512,909 - HP15_2383 0.27 -1.1
2,512,909 - +0.4
2,512,909 - HP15_2383 0.27 -4.4
2,512,909 - HP15_2383 0.27 -5.9
2,512,976 - HP15_2383 0.30 -6.4
2,512,999 - HP15_2383 0.32 -3.0
2,513,054 + HP15_2383 0.35 -2.9
2,513,081 + HP15_2383 0.36 -2.0
2,513,112 - HP15_2383 0.38 -2.6
2,513,128 + HP15_2383 0.39 -3.0
2,513,279 - HP15_2383 0.47 -2.3
2,513,327 + HP15_2383 0.50 -2.1
2,513,335 - HP15_2383 0.50 -4.0
2,513,343 - HP15_2383 0.51 -4.8
2,513,368 - HP15_2383 0.52 -3.6
2,513,375 - HP15_2383 0.53 -3.9
2,513,377 - HP15_2383 0.53 -3.0
2,513,488 - HP15_2383 0.59 -3.3
2,513,514 - HP15_2383 0.60 -3.7
2,513,514 - HP15_2383 0.60 -4.0
2,513,524 - HP15_2383 0.61 -0.6
2,513,524 - HP15_2383 0.61 -3.9
2,513,542 - HP15_2383 0.62 -3.8
2,513,547 - HP15_2383 0.62 -3.5
2,513,554 - HP15_2383 0.62 -5.4
2,513,689 + HP15_2383 0.70 -0.9
2,513,689 - HP15_2383 0.70 -1.1
2,513,695 + HP15_2383 0.70 -3.6
2,513,733 + HP15_2383 0.72 -3.1
2,513,739 + HP15_2383 0.73 -0.6
2,513,777 + HP15_2383 0.75 -3.7
2,513,798 + HP15_2383 0.76 -3.4
2,513,806 + HP15_2383 0.76 +0.4
2,513,808 + HP15_2383 0.76 -2.4
2,513,857 + HP15_2383 0.79 -2.0
2,513,876 + HP15_2383 0.80 -2.9
2,513,876 + HP15_2383 0.80 -1.4
2,513,975 - HP15_2383 0.86 -1.4
2,514,000 + HP15_2383 0.87 -2.7
2,514,000 + HP15_2383 0.87 -3.9
2,514,001 + HP15_2383 0.87 -0.9
2,514,006 + HP15_2383 0.87 -4.0
2,514,008 + HP15_2383 0.88 -2.0
2,514,014 - HP15_2383 0.88 -6.0
2,514,058 - -3.1
2,514,098 + -4.1
2,514,108 - -3.3
2,514,195 + -3.3
2,514,217 - -1.9
2,514,240 + -0.6
2,514,240 - -2.0
2,514,253 - -1.8
2,514,355 - -5.1
2,515,026 - -0.4
2,515,036 - -0.1
2,515,046 - -0.3
2,515,084 - +1.1
2,515,181 + HP15_2385 0.11 +0.4

Or see this region's nucleotide sequence