Strain Fitness in Marinobacter adhaerens HP15 around HP15_1793

Experiment: L-Isoleucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1792 and HP15_1793 are separated by 33 nucleotidesHP15_1793 and HP15_1794 are separated by 1 nucleotidesHP15_1794 and HP15_1795 are separated by 284 nucleotides HP15_1792: HP15_1792 - B12-dependent methionine synthase, at 1,883,167 to 1,886,865 _1792 HP15_1793: HP15_1793 - conserved hypothetical protein, at 1,886,899 to 1,887,135 _1793 HP15_1794: HP15_1794 - secreted protein, at 1,887,137 to 1,887,241 _1794 HP15_1795: HP15_1795 - sulfite reductase hemoprotein, beta subunit, at 1,887,526 to 1,889,148 _1795 Position (kb) 1886 1887 1888Strain fitness (log2 ratio) -3 -2 -1 0 1at 1885.940 kb on - strand, within HP15_1792at 1886.185 kb on + strand, within HP15_1792at 1886.229 kb on - strand, within HP15_1792at 1886.229 kb on - strand, within HP15_1792at 1886.229 kb on - strand, within HP15_1792at 1886.241 kb on + strand, within HP15_1792at 1886.253 kb on + strand, within HP15_1792at 1886.300 kb on - strand, within HP15_1792at 1886.516 kb on - strandat 1886.891 kb on - strandat 1887.072 kb on + strand, within HP15_1793at 1887.158 kb on - strand, within HP15_1794at 1887.244 kb on + strandat 1887.304 kb on + strandat 1887.353 kb on + strandat 1887.426 kb on + strandat 1887.649 kb on - strandat 1888.010 kb on + strand, within HP15_1795at 1888.018 kb on - strand, within HP15_1795

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine as (N)
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1,885,940 - HP15_1792 0.75 -0.6
1,886,185 + HP15_1792 0.82 -1.2
1,886,229 - HP15_1792 0.83 -1.2
1,886,229 - HP15_1792 0.83 -0.5
1,886,229 - HP15_1792 0.83 -0.4
1,886,241 + HP15_1792 0.83 -1.3
1,886,253 + HP15_1792 0.83 +0.3
1,886,300 - HP15_1792 0.85 -0.7
1,886,516 - +0.7
1,886,891 - -0.5
1,887,072 + HP15_1793 0.73 -0.6
1,887,158 - HP15_1794 0.20 +0.8
1,887,244 + -0.3
1,887,304 + -2.6
1,887,353 + -0.4
1,887,426 + -0.9
1,887,649 - -2.6
1,888,010 + HP15_1795 0.30 -2.9
1,888,018 - HP15_1795 0.30 -2.0

Or see this region's nucleotide sequence