Experiment: L-Isoleucine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1150 and HP15_1151 are separated by 169 nucleotides HP15_1151 and HP15_1152 overlap by 23 nucleotides HP15_1152 and HP15_1153 are separated by 7 nucleotides HP15_1153 and HP15_1154 are separated by 82 nucleotides
HP15_1150: HP15_1150 - oxidoreductase, zinc-binding dehydrogenase family, at 1,184,958 to 1,185,983
_1150
HP15_1151: HP15_1151 - conserved hypothetical protein, at 1,186,153 to 1,186,566
_1151
HP15_1152: HP15_1152 - conserved hypothetical protein, at 1,186,544 to 1,187,128
_1152
HP15_1153: HP15_1153 - conserved hypothetical protein containing DUF1853, at 1,187,136 to 1,188,032
_1153
HP15_1154: HP15_1154 - glyoxalase/bleomycin resistance protein/dioxygenase, at 1,188,115 to 1,188,537
_1154
Position (kb)
1186
1187
1188 Strain fitness (log2 ratio)
-2
-1
0
1 at 1185.579 kb on - strand, within HP15_1150 at 1185.614 kb on - strand, within HP15_1150 at 1185.670 kb on + strand, within HP15_1150 at 1185.691 kb on + strand, within HP15_1150 at 1185.724 kb on - strand, within HP15_1150 at 1185.749 kb on + strand, within HP15_1150 at 1185.842 kb on + strand, within HP15_1150 at 1186.038 kb on - strand at 1186.053 kb on + strand at 1186.326 kb on + strand, within HP15_1151 at 1186.390 kb on - strand, within HP15_1151 at 1186.439 kb on + strand, within HP15_1151 at 1186.548 kb on - strand at 1186.746 kb on + strand, within HP15_1152 at 1186.747 kb on + strand, within HP15_1152 at 1186.747 kb on + strand, within HP15_1152 at 1186.755 kb on - strand, within HP15_1152 at 1186.756 kb on + strand, within HP15_1152 at 1186.857 kb on - strand, within HP15_1152 at 1186.911 kb on - strand, within HP15_1152 at 1186.970 kb on - strand, within HP15_1152 at 1186.983 kb on + strand, within HP15_1152 at 1187.037 kb on - strand, within HP15_1152 at 1187.079 kb on + strand at 1187.245 kb on + strand, within HP15_1153 at 1187.415 kb on - strand, within HP15_1153 at 1187.515 kb on - strand, within HP15_1153 at 1187.579 kb on - strand, within HP15_1153 at 1187.771 kb on - strand, within HP15_1153 at 1187.981 kb on - strand at 1187.994 kb on - strand at 1188.004 kb on - strand at 1188.080 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine as (N) remove 1,185,579 - HP15_1150 0.61 -1.0 1,185,614 - HP15_1150 0.64 -0.2 1,185,670 + HP15_1150 0.69 -1.1 1,185,691 + HP15_1150 0.71 +1.4 1,185,724 - HP15_1150 0.75 +1.1 1,185,749 + HP15_1150 0.77 -0.4 1,185,842 + HP15_1150 0.86 -0.3 1,186,038 - -0.1 1,186,053 + +0.2 1,186,326 + HP15_1151 0.42 -2.6 1,186,390 - HP15_1151 0.57 -0.3 1,186,439 + HP15_1151 0.69 -0.2 1,186,548 - -0.5 1,186,746 + HP15_1152 0.35 -0.2 1,186,747 + HP15_1152 0.35 -0.6 1,186,747 + HP15_1152 0.35 -0.6 1,186,755 - HP15_1152 0.36 -0.1 1,186,756 + HP15_1152 0.36 -0.1 1,186,857 - HP15_1152 0.54 +0.0 1,186,911 - HP15_1152 0.63 -0.5 1,186,970 - HP15_1152 0.73 -0.8 1,186,983 + HP15_1152 0.75 -0.8 1,187,037 - HP15_1152 0.84 -0.5 1,187,079 + -0.2 1,187,245 + HP15_1153 0.12 -0.1 1,187,415 - HP15_1153 0.31 -0.3 1,187,515 - HP15_1153 0.42 +0.8 1,187,579 - HP15_1153 0.49 +1.4 1,187,771 - HP15_1153 0.71 -0.6 1,187,981 - -0.5 1,187,994 - -1.0 1,188,004 - +0.5 1,188,080 + -0.1
Or see this region's nucleotide sequence