Strain Fitness in Marinobacter adhaerens HP15 around HP15_1152

Experiment: L-Isoleucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1150 and HP15_1151 are separated by 169 nucleotidesHP15_1151 and HP15_1152 overlap by 23 nucleotidesHP15_1152 and HP15_1153 are separated by 7 nucleotidesHP15_1153 and HP15_1154 are separated by 82 nucleotides HP15_1150: HP15_1150 - oxidoreductase, zinc-binding dehydrogenase family, at 1,184,958 to 1,185,983 _1150 HP15_1151: HP15_1151 - conserved hypothetical protein, at 1,186,153 to 1,186,566 _1151 HP15_1152: HP15_1152 - conserved hypothetical protein, at 1,186,544 to 1,187,128 _1152 HP15_1153: HP15_1153 - conserved hypothetical protein containing DUF1853, at 1,187,136 to 1,188,032 _1153 HP15_1154: HP15_1154 - glyoxalase/bleomycin resistance protein/dioxygenase, at 1,188,115 to 1,188,537 _1154 Position (kb) 1186 1187 1188Strain fitness (log2 ratio) -2 -1 0 1at 1185.579 kb on - strand, within HP15_1150at 1185.614 kb on - strand, within HP15_1150at 1185.670 kb on + strand, within HP15_1150at 1185.691 kb on + strand, within HP15_1150at 1185.724 kb on - strand, within HP15_1150at 1185.749 kb on + strand, within HP15_1150at 1185.842 kb on + strand, within HP15_1150at 1186.038 kb on - strandat 1186.053 kb on + strandat 1186.326 kb on + strand, within HP15_1151at 1186.390 kb on - strand, within HP15_1151at 1186.439 kb on + strand, within HP15_1151at 1186.548 kb on - strandat 1186.746 kb on + strand, within HP15_1152at 1186.747 kb on + strand, within HP15_1152at 1186.747 kb on + strand, within HP15_1152at 1186.755 kb on - strand, within HP15_1152at 1186.756 kb on + strand, within HP15_1152at 1186.857 kb on - strand, within HP15_1152at 1186.911 kb on - strand, within HP15_1152at 1186.970 kb on - strand, within HP15_1152at 1186.983 kb on + strand, within HP15_1152at 1187.037 kb on - strand, within HP15_1152at 1187.079 kb on + strandat 1187.245 kb on + strand, within HP15_1153at 1187.415 kb on - strand, within HP15_1153at 1187.515 kb on - strand, within HP15_1153at 1187.579 kb on - strand, within HP15_1153at 1187.771 kb on - strand, within HP15_1153at 1187.981 kb on - strandat 1187.994 kb on - strandat 1188.004 kb on - strandat 1188.080 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine as (N)
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1,185,579 - HP15_1150 0.61 -1.0
1,185,614 - HP15_1150 0.64 -0.2
1,185,670 + HP15_1150 0.69 -1.1
1,185,691 + HP15_1150 0.71 +1.4
1,185,724 - HP15_1150 0.75 +1.1
1,185,749 + HP15_1150 0.77 -0.4
1,185,842 + HP15_1150 0.86 -0.3
1,186,038 - -0.1
1,186,053 + +0.2
1,186,326 + HP15_1151 0.42 -2.6
1,186,390 - HP15_1151 0.57 -0.3
1,186,439 + HP15_1151 0.69 -0.2
1,186,548 - -0.5
1,186,746 + HP15_1152 0.35 -0.2
1,186,747 + HP15_1152 0.35 -0.6
1,186,747 + HP15_1152 0.35 -0.6
1,186,755 - HP15_1152 0.36 -0.1
1,186,756 + HP15_1152 0.36 -0.1
1,186,857 - HP15_1152 0.54 +0.0
1,186,911 - HP15_1152 0.63 -0.5
1,186,970 - HP15_1152 0.73 -0.8
1,186,983 + HP15_1152 0.75 -0.8
1,187,037 - HP15_1152 0.84 -0.5
1,187,079 + -0.2
1,187,245 + HP15_1153 0.12 -0.1
1,187,415 - HP15_1153 0.31 -0.3
1,187,515 - HP15_1153 0.42 +0.8
1,187,579 - HP15_1153 0.49 +1.4
1,187,771 - HP15_1153 0.71 -0.6
1,187,981 - -0.5
1,187,994 - -1.0
1,188,004 - +0.5
1,188,080 + -0.1

Or see this region's nucleotide sequence