Experiment: defined media with 30 mM sodium lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2309 and Dsui_2310 are separated by 37 nucleotides Dsui_2310 and Dsui_2311 are separated by 40 nucleotides Dsui_2311 and Dsui_2312 are separated by 207 nucleotides
Dsui_2309: Dsui_2309 - selenium donor protein, at 2,464,841 to 2,465,887
_2309
Dsui_2310: Dsui_2310 - tRNA 2-selenouridine synthase, at 2,465,925 to 2,467,013
_2310
Dsui_2311: Dsui_2311 - isochorismate hydrolase, at 2,467,054 to 2,467,596
_2311
Dsui_2312: Dsui_2312 - 3-hydroxybutyrate dehydrogenase, at 2,467,804 to 2,468,586
_2312
Position (kb)
2465
2466
2467
2468 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2464.970 kb on - strand, within Dsui_2309 at 2465.003 kb on - strand, within Dsui_2309 at 2465.167 kb on - strand, within Dsui_2309 at 2465.327 kb on - strand, within Dsui_2309 at 2465.331 kb on - strand, within Dsui_2309 at 2465.358 kb on + strand, within Dsui_2309 at 2465.366 kb on - strand, within Dsui_2309 at 2465.394 kb on - strand, within Dsui_2309 at 2465.437 kb on - strand, within Dsui_2309 at 2465.466 kb on + strand, within Dsui_2309 at 2465.726 kb on - strand, within Dsui_2309 at 2465.807 kb on + strand at 2465.913 kb on - strand at 2466.148 kb on - strand at 2466.156 kb on + strand, within Dsui_2310 at 2466.166 kb on + strand, within Dsui_2310 at 2466.319 kb on + strand, within Dsui_2310 at 2466.343 kb on + strand, within Dsui_2310 at 2466.389 kb on + strand, within Dsui_2310 at 2466.528 kb on + strand, within Dsui_2310 at 2466.647 kb on + strand, within Dsui_2310 at 2466.673 kb on + strand, within Dsui_2310 at 2466.827 kb on - strand, within Dsui_2310 at 2466.852 kb on + strand, within Dsui_2310 at 2466.917 kb on + strand at 2466.946 kb on + strand at 2467.049 kb on + strand at 2467.059 kb on + strand at 2467.064 kb on + strand at 2467.128 kb on + strand, within Dsui_2311 at 2467.131 kb on - strand at 2467.169 kb on - strand, within Dsui_2311 at 2467.398 kb on - strand at 2467.553 kb on + strand at 2467.563 kb on + strand at 2467.571 kb on - strand at 2467.787 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate remove 2,464,970 - Dsui_2309 0.12 -0.1 2,465,003 - Dsui_2309 0.15 -0.1 2,465,167 - Dsui_2309 0.31 -1.7 2,465,327 - Dsui_2309 0.46 -1.2 2,465,331 - Dsui_2309 0.47 -0.7 2,465,358 + Dsui_2309 0.49 -0.7 2,465,366 - Dsui_2309 0.50 -0.6 2,465,394 - Dsui_2309 0.53 -0.9 2,465,437 - Dsui_2309 0.57 -0.5 2,465,466 + Dsui_2309 0.60 -1.0 2,465,726 - Dsui_2309 0.85 -0.9 2,465,807 + -0.2 2,465,913 - +0.2 2,466,148 - +1.2 2,466,156 + Dsui_2310 0.21 -0.6 2,466,166 + Dsui_2310 0.22 +0.6 2,466,319 + Dsui_2310 0.36 -1.8 2,466,343 + Dsui_2310 0.38 -1.7 2,466,389 + Dsui_2310 0.43 -0.3 2,466,528 + Dsui_2310 0.55 -0.9 2,466,647 + Dsui_2310 0.66 -0.8 2,466,673 + Dsui_2310 0.69 -0.8 2,466,827 - Dsui_2310 0.83 +1.0 2,466,852 + Dsui_2310 0.85 +0.2 2,466,917 + +0.1 2,466,946 + +0.1 2,467,049 + -0.4 2,467,059 + -1.2 2,467,064 + +0.2 2,467,128 + Dsui_2311 0.14 -0.3 2,467,131 - +2.8 2,467,169 - Dsui_2311 0.21 -0.4 2,467,398 - +1.2 2,467,553 + -2.0 2,467,563 + -0.8 2,467,571 - +0.6 2,467,787 + -0.4
Or see this region's nucleotide sequence