Experiment: defined media with 30 mM sodium lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2170 and Dsui_2171 overlap by 4 nucleotides Dsui_2171 and Dsui_2172 are separated by 37 nucleotides Dsui_2172 and Dsui_2173 are separated by 172 nucleotides Dsui_2173 and Dsui_2174 are separated by 203 nucleotides
Dsui_2170: Dsui_2170 - putative iron-regulated membrane protein, at 2,306,569 to 2,308,077
_2170
Dsui_2171: Dsui_2171 - Protein of unknown function (DUF3325), at 2,308,074 to 2,308,430
_2171
Dsui_2172: Dsui_2172 - transcriptional regulator, at 2,308,468 to 2,308,944
_2172
Dsui_2173: Dsui_2173 - peroxiredoxin, Ohr subfamily, at 2,309,117 to 2,309,542
_2173
Dsui_2174: Dsui_2174 - putative signal transduction protein, at 2,309,746 to 2,310,600
_2174
Position (kb)
2308
2309 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2307.470 kb on + strand at 2307.470 kb on + strand at 2307.470 kb on + strand at 2307.532 kb on + strand at 2307.594 kb on + strand at 2307.891 kb on + strand, within Dsui_2170 at 2308.009 kb on + strand at 2308.017 kb on - strand at 2308.113 kb on - strand at 2308.129 kb on + strand, within Dsui_2171 at 2308.135 kb on + strand at 2308.392 kb on + strand at 2308.409 kb on - strand at 2308.594 kb on + strand, within Dsui_2172 at 2308.594 kb on + strand, within Dsui_2172 at 2308.849 kb on + strand, within Dsui_2172 at 2308.957 kb on + strand at 2308.970 kb on + strand at 2309.060 kb on + strand at 2309.060 kb on + strand at 2309.078 kb on - strand at 2309.157 kb on - strand at 2309.199 kb on + strand, within Dsui_2173 at 2309.329 kb on + strand, within Dsui_2173 at 2309.356 kb on - strand at 2309.361 kb on - strand at 2309.536 kb on + strand at 2309.589 kb on + strand at 2309.627 kb on - strand at 2309.770 kb on - strand at 2309.781 kb on - strand at 2309.866 kb on + strand at 2309.866 kb on + strand at 2309.874 kb on - strand, within Dsui_2174 at 2309.874 kb on - strand, within Dsui_2174 at 2309.879 kb on - strand, within Dsui_2174 at 2309.896 kb on + strand, within Dsui_2174 at 2309.904 kb on - strand, within Dsui_2174 at 2309.908 kb on + strand, within Dsui_2174
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 30 mM sodium lactate remove 2,307,470 + +0.2 2,307,470 + +0.6 2,307,470 + +1.2 2,307,532 + +1.6 2,307,594 + +1.2 2,307,891 + Dsui_2170 0.88 -0.0 2,308,009 + +0.6 2,308,017 - +2.2 2,308,113 - +2.2 2,308,129 + Dsui_2171 0.15 -1.4 2,308,135 + +2.2 2,308,392 + +1.2 2,308,409 - +2.2 2,308,594 + Dsui_2172 0.26 +2.8 2,308,594 + Dsui_2172 0.26 +2.2 2,308,849 + Dsui_2172 0.80 +0.6 2,308,957 + -0.0 2,308,970 + -1.1 2,309,060 + -0.9 2,309,060 + +2.2 2,309,078 - +2.2 2,309,157 - +1.2 2,309,199 + Dsui_2173 0.19 -0.9 2,309,329 + Dsui_2173 0.50 -0.6 2,309,356 - -0.1 2,309,361 - +0.6 2,309,536 + -1.6 2,309,589 + -0.4 2,309,627 - +0.2 2,309,770 - -0.6 2,309,781 - +0.4 2,309,866 + +0.6 2,309,866 + +1.2 2,309,874 - Dsui_2174 0.15 +0.2 2,309,874 - Dsui_2174 0.15 -1.3 2,309,879 - Dsui_2174 0.16 -0.6 2,309,896 + Dsui_2174 0.18 -0.4 2,309,904 - Dsui_2174 0.18 +0.1 2,309,908 + Dsui_2174 0.19 -0.9
Or see this region's nucleotide sequence